| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2954 |
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| Symbol | |
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| ID | 5744015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3621795 |
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| End bp | 3622733 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294054 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001560050 |
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| Protein GI | 160881082 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG TTTATTTATG GGATATGCTT CTGCCAATTA CGCCTTCAAA AATTGTCACA
AAAATAAACA ATCAGAATAA AACGTTAACG TTACTTAATG GCCAGGAGAT CAATTTAGTA
AAATCTCCTG GTCTTACTGA TATTAATTTT CAAATGATAC TACCAGGAAA TAAATATCCT
TTTGTCATTG GTAGTTACAA ATCGCCAAAC TGGTATCTTA ACAGATTACA GGAACTGAAA
GTTAATAAAT TTTATACTAC ACTGTTAGTA TCAAGAGAAA TCAAGGGCAG AGAGTGGTTC
AAGCAAGAGA TGGATGTTAC CCTCGAAGAC TACTCCATAA CGGAAGATTC TAAAAACGGG
TTCGATTTAG TTGTTGATGT CAAACTCAAG CAATACATCG ATTATGGAGT TAAATACGTC
ATACTTGAAA ATGTAAAGGA TGGTGTAGTT GAGAAGAAAA CTAGATCCTC TTCCAAGACA
ATCCCAAAAA CTTATACCGT TGCGAATGGT GATACTCTTT GGGCCATTGC TAAGAAGTTA
CTAGGAGACG GTTCAAAGTG TTGGAACCTA GCAAAATTAA ACAATATCAA AAACCCTAAT
ATTATCTTTG TTGGACAGGT TTTAAAGATT CAGGATGTTC CGGCAACAAC GCAAAAAAGC
ACATCCACAT CTCAGAAAAC AGGTAGTTCG AGTACGTCGT CTATCACTAC TACTGCATTG
GGTGGAAAGA GTGATACTAT GAAAAAAGCA ACAACTTCCG CCCCACTTAG TAATACTGGT
ATACTTCAGG CAAAATTATC TGGTAACGAA GGACAAGGCA GTTATGATCT CAGAAAAGAT
TGGTTAGGAG GCTTAAATGT ACCAGGTCAG CTTAATAATA AAAAACAAAC TGTATTTCCC
CGTAGTGAGT GGTGGGCTAG TATGGACCAC GGAACGTAA
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| Protein sequence | MYKVYLWDML LPITPSKIVT KINNQNKTLT LLNGQEINLV KSPGLTDINF QMILPGNKYP
FVIGSYKSPN WYLNRLQELK VNKFYTTLLV SREIKGREWF KQEMDVTLED YSITEDSKNG
FDLVVDVKLK QYIDYGVKYV ILENVKDGVV EKKTRSSSKT IPKTYTVANG DTLWAIAKKL
LGDGSKCWNL AKLNNIKNPN IIFVGQVLKI QDVPATTQKS TSTSQKTGSS STSSITTTAL
GGKSDTMKKA TTSAPLSNTG ILQAKLSGNE GQGSYDLRKD WLGGLNVPGQ LNNKKQTVFP
RSEWWASMDH GT
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