| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2865 |
|---|
| Symbol | |
|---|
| ID | 5745139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3514882 |
|---|
| End bp | 3515346 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641293967 |
|---|
| Product | SsrA-binding protein |
|---|
| Protein accession | YP_001559964 |
|---|
| Protein GI | 160880996 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0691] tmRNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000473081 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AAGGTATTAA GCTAATTGCA AATAATAAAA AAGCCAGATT CGACTATTTC
ATAGAGGAAA CGTATGAAGC TGGTGTCGTA TTACACGGCA CCGAAGTAAA ATCCCTACGT
ATGGGAAAAT GCAGTATTAA AGAATCCTTT ATGCGTATTG AAAATGGGGA AGTTTATGTT
TATAACATGC ATATAAGCCC ATATGAAAAA GGAAATATAT TTAACAAAGA TCCATTGCGT
GTTAAAAAGT TATTACTTCA TAAATTTCAG ATAAATAAAA TTGTTGGTCA GATCCAGCAA
AAAGGATATA CTTTGGTTCC GTTAACGATT TATCTAAAAG ATAGTCTAGT AAAGATGGAA
ATCGGAGTAG CTAGGGGTAA GAAGCTCTAT GACAAGCGAC AGGATATTGC AAAGAAAGAT
CAGAAAAGAG AAGCGGAGAA AGACTTTAAG GTAAAGAATC TCTAG
|
|---|
| Protein sequence | MAKEGIKLIA NNKKARFDYF IEETYEAGVV LHGTEVKSLR MGKCSIKESF MRIENGEVYV
YNMHISPYEK GNIFNKDPLR VKKLLLHKFQ INKIVGQIQQ KGYTLVPLTI YLKDSLVKME
IGVARGKKLY DKRQDIAKKD QKREAEKDFK VKNL
|
|---|
| |