Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2848 |
Symbol | |
ID | 5742168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3490641 |
End bp | 3492104 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293944 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001559947 |
Protein GI | 160880979 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAGTA GGAGGAGACT TCTTAGTTGG AACTATAAAG TATTTACAGA GAAGGGAGCT AGTCAGATGA AGTATCAGAG TAATATGGTA TCAGATTTAC AAATAGCTTA TATTGGTGGA GGTTCCCGAG GATGGGCATG GACTTTCATG ACTGACCTAG CAAGAGAGCC AAAATTATCT GGTACTGTTA GGCTGTTTGA TATTGATAAA TCCGCAGCAG AACAAAATAT GTTTATTGGA AATTCAATCA CACAAAGAGA AGATGCCATT GGAAAATGGA ACTATGAAAC AAAAGAAACA TTAGAGGAGG CTCTAACCGG TGCAGATTTT ATTGTGATAT CGATATTGCC TGGGACTTTT GATGAAATGG AATCTGATGT ACATACCCCA GAACGTTTGG GAATTTATCA ATCTGTTGGA GATACTGCAG GTCCTGGTGG CATAATACGT GCACTTCGCA CCATTCCTAT GTTTGTTGAT ATAGCAGAAG CAGTAAAAAA ATATGCTCCT AAAGCATGGG TAATTAATTA TACGAATCCA ATGACTTTAT GTGTGAAAAC ATTATATCAT GTATTTCCAG AGATTAAAGC ATTTGGTTGT TGTCATGAAG TATTTGGAAC TCAGAAAGTT TTAAAAGGGA TCGCAGAACA GGTGCTTGGT ATTGAGGATA TACCAAGAAA TGAAGTTCAT GTTAATGTCT TAGGGATTAA TCACTTTACT TGGTTTGATT ATGCATCCTA TCAAGGAATA GATTTATTCC CTATCTATAG AGATTATGTA AAGGAACATT TTGAGGAAGG TTTTATAGAA AATGATGCAA ACTGGGCAAA TACTACATTT GCATGTTCTC ATCGTGTAAA ATTTGATTTA TTCCAGAAAT ATGGATTGAT TGCAGCTGCA GGAGATCGTC ACTTGGCAGA GTTTGTACCT GGCGATTGGT ACTTGAAAGA TCCGGAAAAC GTAAAGAGCT GGAAGTTTGG ATTAACTACA GTAGATTGGA GAAAGGAAGA CCTTAAACAG AGACTTGAGA AAAGCCATCG TTTAGTGAGT GGAGAAGAGA AAGTTGATTT AAAGGCATCT GGAGAAGAAG GAATTTTATT AATAAAAGCG CTCTGTGGTT TAGAAAGAGT TGTAAGTAAT GTAAATATTC CAAATACCAA CAGGCAAATA CCGAATATAC CAGATTCAGT GGTGGTTGAG ACAAATGCTA TTTTTGAGAG GGATGCCATA CGTCCAATTA TTGCAGGGGA GATGCCAGAC TCTATCTTAC ATTTAACCAT ACCACATATA CAAAACCATG AACTAGTATT AAAGGCTGCA CTTACATGTG ATAAAGAGTT AGTAAAGCAG GCATTCGCCA ATGATCCATT AGTGAAAGGA AGAGCTACTG CGGAGGAAAT TGATTTACTG GTAGAGGACA TGATTCAGGG ATCTATAAAA TACTTGCCGG AAGGCTGGAA ATAA
|
Protein sequence | MTSRRRLLSW NYKVFTEKGA SQMKYQSNMV SDLQIAYIGG GSRGWAWTFM TDLAREPKLS GTVRLFDIDK SAAEQNMFIG NSITQREDAI GKWNYETKET LEEALTGADF IVISILPGTF DEMESDVHTP ERLGIYQSVG DTAGPGGIIR ALRTIPMFVD IAEAVKKYAP KAWVINYTNP MTLCVKTLYH VFPEIKAFGC CHEVFGTQKV LKGIAEQVLG IEDIPRNEVH VNVLGINHFT WFDYASYQGI DLFPIYRDYV KEHFEEGFIE NDANWANTTF ACSHRVKFDL FQKYGLIAAA GDRHLAEFVP GDWYLKDPEN VKSWKFGLTT VDWRKEDLKQ RLEKSHRLVS GEEKVDLKAS GEEGILLIKA LCGLERVVSN VNIPNTNRQI PNIPDSVVVE TNAIFERDAI RPIIAGEMPD SILHLTIPHI QNHELVLKAA LTCDKELVKQ AFANDPLVKG RATAEEIDLL VEDMIQGSIK YLPEGWK
|
| |