Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2830 |
Symbol | |
ID | 5742146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3454422 |
End bp | 3455084 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293922 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001559929 |
Protein GI | 160880961 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCAA GAGTAAGTTT TGAATATGAG TTAACAATAT TAAATAACAA TTTAAGAGAT ATGGGTACTT TAATTGAATC AGCGATTGAT AAAGTAATCA AAGCTTTTGA AAATGAAGAT GGAACACTAG CAACGGAGAT AATTCAAGGA GACCGTACCA TTAATGATAT GGAACGAGTA ATCGAATCAA GATGTCTCTC TTTAATTCTT CGTCAGCAAC CGGTAGCAAA AGACCTAAGA ATTGTGACTA CTGCTCTTAA GGTAGTAACA GATATGGAAC GTATCGGAGA CCACGCTGCA GACATATCAG AATTAATACT TCGTAATATC AAACAAAATA CGTATAGTAT CGTAAAAGCA ATACCTAAGA TGGCGCAGGT AGCAAAAGAG ATGGTGCATG ATGCGGTAGA TGCATTTATT TCCTGCGATA CAGAGGCAGC AAGGGTTACC ATAAAAAAAG ATGATATCGT CGATGACTTA TTCAATGAAG TAAAAAGTAC TGTCATTGAA GCAATGAAAA ATAGTGGTGA AAATGCGGAT AGCTATATTG ACATTTTAAT GATTGCAAAG TACATGGAGA GAATTGGGGA CCATGCCGTA AATATCTGTG AGTGGACAGA GTTCCATGAA ACTGGTTCCC TTAATAATGT ACGTATTTTA TAA
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Protein sequence | MAPRVSFEYE LTILNNNLRD MGTLIESAID KVIKAFENED GTLATEIIQG DRTINDMERV IESRCLSLIL RQQPVAKDLR IVTTALKVVT DMERIGDHAA DISELILRNI KQNTYSIVKA IPKMAQVAKE MVHDAVDAFI SCDTEAARVT IKKDDIVDDL FNEVKSTVIE AMKNSGENAD SYIDILMIAK YMERIGDHAV NICEWTEFHE TGSLNNVRIL
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