| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2787 |
|---|
| Symbol | |
|---|
| ID | 5742102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3392857 |
|---|
| End bp | 3394113 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641293878 |
|---|
| Product | histidine--tRNA ligase |
|---|
| Protein accession | YP_001559886 |
|---|
| Protein GI | 160880918 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAT TATTACACAC CCCAGAGGGT GTTCGTGATA TTTATAACTC TGAGTTTGCA
AAGAAAAAGA TGCTAGAACA AGAGCTTAGT AAGCGCTTGG CACTGCATGG ATTTCATGAG
ATACAAACCC CGATGTTTGA GTTTTTTGAT ATTTTTAGCA AAGAACGTGG AAGTGTAAGT
GGTAAAGAGA TGTATAAGTT TTTTGATAGG GAAGGTAATA CCTTAGTACT TCGCCCAGAT
ATCACACCAT CCATAGCACG CTGCGTTGCT AAATACTATA AGACAGAAGA GATGCCAATA
CGTTTAAGTT ATTGTGGAAG CACTTTTATT AATAGTAGCA GTTACCAGGG GAAATTAAAG
GAAACTACTC AGTTAGGAGC AGAATTAATT AATGATGCAA GTATAGAAGC GGATGCTGAG
ATGATTGCAT TGACGGTAGA ATGCTTAAAA TGTGCCGGTT TAAAAGAGTT TCAAGTAGAA
ATAGGTCAAG CTGACTTCTT TCTCGGAATT GTAGAAGAAG CAGGATTTGA TGAAGATGAA
ACCGAACAGT TACGTATTCT GATTGAAAAT AAGAATTTAT TTGGTGTGGA AGAACTAATT
AGTGGAAAGA AGTTAGAAAA ACCTGTAAAG AGTGTTATTT TACAGTTAAC TGACCTTTTT
GGAACACTAG ATAAAGTACT TGGTGTGAAG GAATCCATCC ATAATGAACG TGCAAGAAAT
GCTTTAGAGC GTATGGAAAA ACTATATGAA TTATTAACAC TCTATGGATA TGAACAGTAT
ATCACCTTTG ATTTAGGAAT GCTTAGTAAG TACAATTACT ATACCGGAAT TATTTTCAGA
GCTTACACCT ATGGAACCGG TGATGCGGTG ATTACTGGAG GTCGTTATGA TTCTTTGGTT
TCGCAGTTTG GAAAGCAGGC ACCAGCGATT GGTATGGCTG TTTTAATAGA CCAACTTCTG
ACTGCACTAA GTAGGCAAAA ACTATTAGGA GAGCCTGAAT TAGAGAATAC CTTGATTGTT
TACGATTCTT CTTATATCGC AAATGCTGTG GCTCTTGCCA ATCATTTTCG TGGACAGGAG
ATGAAGATTG AAATGTTGGC CCATGACGAA AGAAAAACGA GAGAGGATTA TATAGCGTAT
GCAAATCGTA TGAGTATTGG TGGTATTCTT GCATTATTTA CCGAAGACGA GGTAGAGGTG
ATTCATGCAA TCGATGGAAC AGTACAAACG GTACCACTCA AAGGAATGTT ATCCTAG
|
|---|
| Protein sequence | MDRLLHTPEG VRDIYNSEFA KKKMLEQELS KRLALHGFHE IQTPMFEFFD IFSKERGSVS
GKEMYKFFDR EGNTLVLRPD ITPSIARCVA KYYKTEEMPI RLSYCGSTFI NSSSYQGKLK
ETTQLGAELI NDASIEADAE MIALTVECLK CAGLKEFQVE IGQADFFLGI VEEAGFDEDE
TEQLRILIEN KNLFGVEELI SGKKLEKPVK SVILQLTDLF GTLDKVLGVK ESIHNERARN
ALERMEKLYE LLTLYGYEQY ITFDLGMLSK YNYYTGIIFR AYTYGTGDAV ITGGRYDSLV
SQFGKQAPAI GMAVLIDQLL TALSRQKLLG EPELENTLIV YDSSYIANAV ALANHFRGQE
MKIEMLAHDE RKTREDYIAY ANRMSIGGIL ALFTEDEVEV IHAIDGTVQT VPLKGMLS
|
|---|
| |