Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2771 |
Symbol | |
ID | 5742086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3374689 |
End bp | 3375612 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293862 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001559870 |
Protein GI | 160880902 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGGTA TCATAAATGT ATATAAGGAA AAAGGTTTTA CTTCCTTTGA TGTTTGTGCA AAACTTAGAG GTATATTAAA ACAAAAGAAA ATTGGCCATA CTGGTACACT GGATCCGGAT GCAGAAGGGG TACTTCCTGT ATGCGTAGGA AACGCAACAA AACTTTGTGA TTTGTTAACA GACAAGGATA AAGTTTATGA AGCGGTTTTA ACCCTAGGAA TTATAACAGA TACGGAAGAT ATGACTGGTG AAGTTCTTGA GAGGCGTCTA GTTACAGCAA CGTATGACAG GGTTTTAGAA GTGGTAGAGC AGTTCACCAG AACGTATGAC CAGATACCAC CAATGTATTC TGCAATAAAG GTCAATGGTC AGAAATTATA TGAGCTTGCT CGTCAGGGTA AGGTAATTGA GAGAAAGCCA AGAACTGTTA CAATACATGC AATTGACATC CTTGGAGTAA CTCCATTAGA AGAACAACCA GAAATCGTAC ATGAAGTAAG AATGAGAGTT TCTTGTTCTA AAGGAACCTA TATTCGATCT TTATGTAGAG ATATTGGAGA AGCACTTCAA TGTGGTGGAT GCATGAAATC ACTAATTCGA ACCCAGGTAA GTATTTTTAC GCTTGAAAAT ACTTTAAGAC TTGCTGAAAT TGAAGAATGT GTAAAAAACC AAACACTAGA ACAGGTACTT ATGCCAGTTG ATAAGTTATT TTTATCTATG CCAAAAGTTG TAGTAAAAAA GGAATCTTGT AAATTTTTAT ACAATGGAAA TCAGCTAGTG GAAGATAATT TTACTTGGGA AAAAGTTAGT GATCAAATTA ATATAGATAA AATTCGGGTT TATGACAGCG AAGATGTCTT TACCGGTATT TATGAATACG ATGAAAAGAA GAATTGCTAT CAACCGGTAA AAATGTTTTT ATAG
|
Protein sequence | MNGIINVYKE KGFTSFDVCA KLRGILKQKK IGHTGTLDPD AEGVLPVCVG NATKLCDLLT DKDKVYEAVL TLGIITDTED MTGEVLERRL VTATYDRVLE VVEQFTRTYD QIPPMYSAIK VNGQKLYELA RQGKVIERKP RTVTIHAIDI LGVTPLEEQP EIVHEVRMRV SCSKGTYIRS LCRDIGEALQ CGGCMKSLIR TQVSIFTLEN TLRLAEIEEC VKNQTLEQVL MPVDKLFLSM PKVVVKKESC KFLYNGNQLV EDNFTWEKVS DQINIDKIRV YDSEDVFTGI YEYDEKKNCY QPVKMFL
|
| |