Gene Cphy_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2771 
Symbol 
ID5742086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3374689 
End bp3375612 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content35% 
IMG OID641293862 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_001559870 
Protein GI160880902 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGTA TCATAAATGT ATATAAGGAA AAAGGTTTTA CTTCCTTTGA TGTTTGTGCA 
AAACTTAGAG GTATATTAAA ACAAAAGAAA ATTGGCCATA CTGGTACACT GGATCCGGAT
GCAGAAGGGG TACTTCCTGT ATGCGTAGGA AACGCAACAA AACTTTGTGA TTTGTTAACA
GACAAGGATA AAGTTTATGA AGCGGTTTTA ACCCTAGGAA TTATAACAGA TACGGAAGAT
ATGACTGGTG AAGTTCTTGA GAGGCGTCTA GTTACAGCAA CGTATGACAG GGTTTTAGAA
GTGGTAGAGC AGTTCACCAG AACGTATGAC CAGATACCAC CAATGTATTC TGCAATAAAG
GTCAATGGTC AGAAATTATA TGAGCTTGCT CGTCAGGGTA AGGTAATTGA GAGAAAGCCA
AGAACTGTTA CAATACATGC AATTGACATC CTTGGAGTAA CTCCATTAGA AGAACAACCA
GAAATCGTAC ATGAAGTAAG AATGAGAGTT TCTTGTTCTA AAGGAACCTA TATTCGATCT
TTATGTAGAG ATATTGGAGA AGCACTTCAA TGTGGTGGAT GCATGAAATC ACTAATTCGA
ACCCAGGTAA GTATTTTTAC GCTTGAAAAT ACTTTAAGAC TTGCTGAAAT TGAAGAATGT
GTAAAAAACC AAACACTAGA ACAGGTACTT ATGCCAGTTG ATAAGTTATT TTTATCTATG
CCAAAAGTTG TAGTAAAAAA GGAATCTTGT AAATTTTTAT ACAATGGAAA TCAGCTAGTG
GAAGATAATT TTACTTGGGA AAAAGTTAGT GATCAAATTA ATATAGATAA AATTCGGGTT
TATGACAGCG AAGATGTCTT TACCGGTATT TATGAATACG ATGAAAAGAA GAATTGCTAT
CAACCGGTAA AAATGTTTTT ATAG
 
Protein sequence
MNGIINVYKE KGFTSFDVCA KLRGILKQKK IGHTGTLDPD AEGVLPVCVG NATKLCDLLT 
DKDKVYEAVL TLGIITDTED MTGEVLERRL VTATYDRVLE VVEQFTRTYD QIPPMYSAIK
VNGQKLYELA RQGKVIERKP RTVTIHAIDI LGVTPLEEQP EIVHEVRMRV SCSKGTYIRS
LCRDIGEALQ CGGCMKSLIR TQVSIFTLEN TLRLAEIEEC VKNQTLEQVL MPVDKLFLSM
PKVVVKKESC KFLYNGNQLV EDNFTWEKVS DQINIDKIRV YDSEDVFTGI YEYDEKKNCY
QPVKMFL