Gene Cphy_2766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2766 
Symbol 
ID5742081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3368015 
End bp3369376 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content35% 
IMG OID641293857 
ProductMATE efflux family protein 
Protein accessionYP_001559865 
Protein GI160880897 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0984562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA TTCACGAAAT GAAGCAAGAT AAAGCCTTTC TGAAAAAGGC CGCAATGATA 
GCTATTCCTA TAGCTTTACA AGGGCTTTTA AACAATGTTT TAAATTTTGT TGATACCCTA
ATGATTAGCC GTCTTGATAC TACAACAGTG GCCGCAGTAG GAATTGCAAA TAAGATTTTT
TTTGTAGTGA GTCTTCTGTT ATTTGGAATT TGCAGTGGCT CTTGTATTCT GACCTCTCAA
TATTGGGGGA TGAGGGATAT TAAAAACATT AAGCGTGTTG TCGGGCTATC CATGCTGCTT
GGTGTTACGA GTGCTTTTTT ATTTACTTTA GTCTCATTTC TAAAGCCTCA ATTAGTAATG
AGTATCTTTA CAAACAGTGA ACCAACAATA ATAATTGGTG CGAAATATTT AAAGATTGTA
TGTATTAGTT ATGTAATAAC AGCAGTCACC CAAATTTTCA TGTCTGCACT TCGAAGTGTG
AATCAGGTAA AACTACCAGT TGTAATTAGC CTTGTTGCGA TAGTGACGAA TGTTATTTTA
AATTATGTCT TGATTTTTGG TAAGTTTGGA TTTCCAGAGC TAGGAGTAGA AGGTGCAGCT
ATAGCCACAT TAATTGCAAG AATTGTAGAG GTTGTAGCAA TGATTTTACT CGTATATTAT
AAGAAAAGTC CAGTTTCAAT TAGCGTGTCA CATCTTTTCT TTTACGATAA AGATTTATAC
TCCATCTACT TTAAAACTGC ATCTCCGGTT ATTATGAATG AGTTTATGTG GGGACTTGGA
ATTACGATGT ATTCCCTTGC CTATGGTAGA ATGGGTGATA ATGCGATGGC TGCTATCACA
ATAACTCAAA ATATTGAACA GATATTACAG GTTGTTTTTA TGGGAATCAG TAATGCAACG
GCAGTTATTC TTGGTAATGA ACTTGGTGCA GGAAAATTAA AGGATGCAGA GCTTCATGCA
AAATTTATAT TAATTCTGCA AGCAATGGTA ACGGTAGTAA TTATTGCACT TGGGATAGTT
TTTATGAATC CAATGATTGC AGTTTTTCAT ATGGAACCAG TTGTTTCTGC ATCTATTCGA
AAGTGCTTAT TGGTGTTCCT TGCTTATTTA TTTTTTAAAG TATTTAATAC GGTTAATATC
GTTGGTATCC TCCGAAGTGG CGGAGATACC AAAGCCGCGT TATTTCTTGA TGTCACTGGT
GTTTGGTTGA TAGGAATACC GATGGCTTTT CTTGGTGGTT TAGTGTTTCA TTTTCCAATA
GAAGCAGTAT ATGCAATGGT TTTATCAGAA GAAATTTATA AGATGATACT TGGAATTCCT
AGATATCGTA AGAAAAAATG GTTGAGGAAT ATCGTAGCTT AG
 
Protein sequence
MNLIHEMKQD KAFLKKAAMI AIPIALQGLL NNVLNFVDTL MISRLDTTTV AAVGIANKIF 
FVVSLLLFGI CSGSCILTSQ YWGMRDIKNI KRVVGLSMLL GVTSAFLFTL VSFLKPQLVM
SIFTNSEPTI IIGAKYLKIV CISYVITAVT QIFMSALRSV NQVKLPVVIS LVAIVTNVIL
NYVLIFGKFG FPELGVEGAA IATLIARIVE VVAMILLVYY KKSPVSISVS HLFFYDKDLY
SIYFKTASPV IMNEFMWGLG ITMYSLAYGR MGDNAMAAIT ITQNIEQILQ VVFMGISNAT
AVILGNELGA GKLKDAELHA KFILILQAMV TVVIIALGIV FMNPMIAVFH MEPVVSASIR
KCLLVFLAYL FFKVFNTVNI VGILRSGGDT KAALFLDVTG VWLIGIPMAF LGGLVFHFPI
EAVYAMVLSE EIYKMILGIP RYRKKKWLRN IVA