Gene Cphy_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2727 
Symbol 
ID5743020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3316130 
End bp3317332 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content37% 
IMG OID641293819 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001559827 
Protein GI160880859 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0115509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA ATGAACGACT AATTTTTCAT GTGGATGTGA ATAGTGCCTT CTTAAGCTGG 
GAATCTGTAC ATCGTTTAGC AGCGGATCCC GAGTCGATTG ACTTACGTAC CATCCCTTCT
GCTGTTGGTG GTGACAAACA AAGCAGGCAC GGTATCGTTT TAGCAAAATC CACCCAGGCA
AAATCTTTTG GCATTGTTAC TGGGGAACCA CTAACTCATG CACTTCAAAA GTGTCCCTCT
TTGGTAGTAG TACCCCCTAA TTTTGAAGTA TATACAAGAT ATTCAGAACG ATTAATGAAT
CTATTATCAG AATATACACC TACTTTGAAC CAATTTAGTA TTGATGAAGC GTTCCTTGAT
ATGACTGATA CTTATCATCT CTTTGGTGCT CCTATGGATA TCGCGAATCA AATTAGAGAT
CGAGTATTGA AGGAATTAGG TTTTACTGTA AACATTGGAA TTTCTACCAA TAAACTACTT
GCTAAGATGG CTTCCGACTT TAAAAAACCG AATCTTTGCC ACTCCTTATT TCCATCTGAA
ATACCAGAAA AGATGTGGCC TCTTCCTGTT GAGGAATTGT TTTTTGTCGG AAAATCCGCG
AAAGCCAAAT TTGGTATCTT AGGAATTCGC AGTATTTACG ATTTAGCACA TACGAATGTA
AATATCCTAA AAACACATCT AGGAAACAAA TATAGTGCTC TAATCCATGA ATACGCGAAT
GGTATCGATG AAGAACCAGT TGAAGTTACT GATCCTAAGG CAAAAGGTTG TGGAAACAGT
ATCACATTAA GTCAAGATGT CATTGATAAC GCAATTGCAA AACAAGTCTT ACTAGCATTA
AGTGAAACCG TTGGTGCAAG GCTACGCTCC TCTAATGTTT CATGTAGCTG CATTACTGTT
GAAATTAAAT ATACTAATTT CCAAACCTAT ACCCATCAAA CAGTCTTACC ACATCAAACG
AACACGACAG CAACTATTTA TGAGGCTGCT TGTCGTTTAT TTGATGAATT TTGGGACAAC
TCACCGATCC GTTTACTAGG TATTCGAACT ACCAAACTAG ACGATACAGA CTTTTCACAG
ATCAGTCTTT TTGATAACAA CCAATCGGAT AAGTTTAAGA AACTTGATTC TGCTATTGAT
TCTATCCGTA ATAAATATGG TATTGATTCC GTAAAAAGAG CTAGTTTTTT AAAGAAGGGT
TGA
 
Protein sequence
MSKNERLIFH VDVNSAFLSW ESVHRLAADP ESIDLRTIPS AVGGDKQSRH GIVLAKSTQA 
KSFGIVTGEP LTHALQKCPS LVVVPPNFEV YTRYSERLMN LLSEYTPTLN QFSIDEAFLD
MTDTYHLFGA PMDIANQIRD RVLKELGFTV NIGISTNKLL AKMASDFKKP NLCHSLFPSE
IPEKMWPLPV EELFFVGKSA KAKFGILGIR SIYDLAHTNV NILKTHLGNK YSALIHEYAN
GIDEEPVEVT DPKAKGCGNS ITLSQDVIDN AIAKQVLLAL SETVGARLRS SNVSCSCITV
EIKYTNFQTY THQTVLPHQT NTTATIYEAA CRLFDEFWDN SPIRLLGIRT TKLDDTDFSQ
ISLFDNNQSD KFKKLDSAID SIRNKYGIDS VKRASFLKKG