| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2622 |
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| Symbol | |
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| ID | 5742789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3210043 |
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| End bp | 3211209 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293714 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001559722 |
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| Protein GI | 160880754 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000349785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATAA TATCAGTTTT GGGATCTACC GGTTCTATTG GTACACAGAC CTTAGAGGTG
GTACGAAATA ACAAGGACTT AAAAGTGTCT GCACTTGCTG CGTCCTCCAA TATTACATTA
TTGGAGGAAC AAATCAGAGA GTTCCATCCG AAACTTGTTT GCGTATATGA TAGGGAGAAG
GCATTAGAGC TAAAGAAAAG AGTTTCTGAC TTAGAGGTTA CCGTTGAGGC AGGAATGGAT
GGTCTTATTG CTTGTGCTAC AGAAGAGAGT GCTGACATTG TAGTCAGTGC CGTTGTTGGT
ATGATAGGAA TCAAACCAGT AATGGAAGCA ATCTTAAGGG GAAAAGACAT AGCATTTGCG
AATAAAGAAA CTTTAGTAAC TGCAGGGCAT CTAATTATGC CATTGGTAAA GAAACATAAC
GTAAATTTAT TACCAGTAGA TAGTGAGCAT TCAGCGATTT TTCAGTGCCT TCAGGGAAAT
GAATCCTCTA CAGTTAGCCG AATTATCTTA ACTGCTTCTG GTGGACCATT TCGTGGGAAA
AGTCTTGCTG AACTTAAGAA TGTGAAGGTG GAAGATGCCT TAAAACATCC AAATTGGTCG
ATGGGTCGAA AGATTACCAT AGATTCCGCT ACAATGGTAA ATAAAGGTCT TGAAGTAATG
GAGGCTCATT GGTTGTTTCA TGAGCCGCTT AATAAAATTG AAGTTGTAAT TCAACCACAA
AGTATTATTC ACTCTGCTGT TGAGTTTGAA GATGGTGGAA TTATAGCACA GCTTGGTACG
CCAGATATGA AATTACCGAT TCAGTATGCA CTTTATTATC CTGAGAAGAG AAGATATCTT
CCAGGGAAAC GCTTAGATTT CTTTGATATT GCTAAGATTA CCTTTGAAAA GCCAGATATC
AGTAACCTAC CGGGGTTACG TTTGGCATAT GAGGCGATGA ATACTGGGCA TAGTGTTCCA
ACCGTGTTTA ATGCAGCCAA TGAGCTAGCA GTAGCAAAAT TCTTAAATCG TGAAATATCG
TTCCTTTCGA TTACGGCACT AATAGAAAAA GCGATGGAGA ATGTTACGGT AGTGAAAAGA
CCTACCTTAG ATGAAATTCT GAATGTGGAA CAGGAAACAT ATGATTTTAT AGAAAGAGAG
TGTGTGAAGT CAAATTATCA TATTTAA
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| Protein sequence | MKIISVLGST GSIGTQTLEV VRNNKDLKVS ALAASSNITL LEEQIREFHP KLVCVYDREK
ALELKKRVSD LEVTVEAGMD GLIACATEES ADIVVSAVVG MIGIKPVMEA ILRGKDIAFA
NKETLVTAGH LIMPLVKKHN VNLLPVDSEH SAIFQCLQGN ESSTVSRIIL TASGGPFRGK
SLAELKNVKV EDALKHPNWS MGRKITIDSA TMVNKGLEVM EAHWLFHEPL NKIEVVIQPQ
SIIHSAVEFE DGGIIAQLGT PDMKLPIQYA LYYPEKRRYL PGKRLDFFDI AKITFEKPDI
SNLPGLRLAY EAMNTGHSVP TVFNAANELA VAKFLNREIS FLSITALIEK AMENVTVVKR
PTLDEILNVE QETYDFIERE CVKSNYHI
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