| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2617 |
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| Symbol | alaS |
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| ID | 5742782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3196835 |
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| End bp | 3199474 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293707 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001559717 |
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| Protein GI | 160880749 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00109675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGT ATGGTGTGAA TGAGCTAAGA AAGATGTACC TAGACTTCTT TGAAAGCAAA
GGACATTTAA AGTTAAATAG TTTTTCTTTG GTACCACAAA ATGATAAGAG CTTATTATTA
ATTAACTCCG GTATGGCACC GTTAAAGCCT TATTTTACAG GACAGGAGAT TCCACCAAAA
AAGCGTGTAA CAACTTGCCA AAAATGTATC CGTACTGGTG ATATCGAGAA TATCGGTAAA
ACAGCAAGAC ATGGTACATT CTTTGAGATG CTTGGTAACT TCTCTTTTGG TGATTACTTT
AAGCATGAAG CAATTGCTTG GTCTTGGGAA TTCCTAACCG AGGTTGTTGG CCTTAGTGGA
GATCGTTTAT ATCCATCTAT TTATTTAGAA GATGATGAAG CATTTGATAT CTGGAATAAA
GAAGTTGGAA TAGCTCCAGA AAGAATTTTC CGTATGGGAA AGGCAGATAA CTTCTGGGAG
CATGGTGCAG GTCCTTGTGG TCCATGTTCT GAGATTTACT ATGATCGTGG TGAAAAATAC
GGTTGTGGTG ATCCAAATTG TACCGTAGGA TGTGAATGTG ACCGTTTCAT CGAAGTATGG
AACAATGTAT TTACTCAGTT CAATAGCGAT GGTAATGGTA ACTACGAAGA ATTAGAGAAT
AAAAACATCG ATACTGGAAT GGGTCTTGAG CGTTTAGCAG TTGTAGTTCA GGATGTTGAT
ACTTTATTTG ATATCGATAC AATGAAAGCA ATCCGTGACC ATGTATGTAA GATGGCGAAT
GCAGAATATA AAGTGGATCC AAAGAAGGAT ATGTCTATCC GCTTAATTAC AGATCATATC
CGTTCTGTAA CATTTATGAC CTCAGATGGT ATTATTCCAT CAAACGAAGG AAGAGGATAC
GTTTTACGTC GTCTACTTCG TAGAGCAGCA AGACATGGCA GATTATTAGG TATCCAAGGC
AAATTCCTTG CTGAGTTAAG CAAGACTGTA ATTGCAGAAT CAAAAGACGG GTATCCAGAA
TTAGAAGAGA AGAAGGAATA CATCCTTAAG GTATTAACCA TTGAGGAAGA GAAATTCAAT
AAGACAATTG ACCAAGGCCT TAGTATCTTA TCTGAGATGG AAGAAGCATT AGTTTCTAAT
GGAACTAAGA CTTTAAATGG AGAAGATGCA TTTAAATTAT ATGATACCTA TGGATTCCCA
TTAGATTTAA CCAAGGAAAT CTTAGAGGAA AAAGGCTTTA GTATTGATGA AGAAGGCTTT
AAGAAAGCAA TGCAAGTTCA GCGTGAAACA GCAAGAAGTG CTCGTGCAGT AACAAACTAC
ATGGGTGCAG ATGCAAGTAT TTACGATGAA ATAGATCCAG CAATTACATC TAACTTTGTT
GGTTATGATA GAACGAGCCA CACTTCTAAA ATTTCGGTTC TTACAACAGA AACCGATTTA
ACGGATGAAG TGGTAGGTGG ACAGACAGCA ACTATTATCG TGGATGAAAC ACCATTCTAT
GCAACAATGG GTGGTCAGAC TGCAGATATC GGTTTCATCG TGGGCAAGGA TGCTGAATTT
GAAGTAGAAG ATACGATCAA GTTAAAAGGT GGTAGAGTTG GACATCTTGG AACAGTAACC
AAGGGTAGCT TTAAGGTTGG AGAGACTGTA ACACTTACCA TTGACACTCA GAAAAGACAG
GCAATTGGTA AGAACCATAG TGCGACTCAT CTTCTTCAGA AGGCATTACG TAATGTTCTT
GGTTCTCACG TAGAGCAGGC TGGTTCTTTT GTTACAAGTG AAAGACTTCG TTTTGACTTT
ACACATTTCT CTGCTTTAAC CAAAGAAGAA ATTGCAAAAG TGGAAGCTAT GGTAAATGAA
GAAATCGCAA AGAATGTACC AGTTGTTACA GATGTAATGA GCGTTGAAGA TGCAAAGAAG
AGTGGTGCGA TGGCATTATT CGGTGAGAAA TATGGCGATA GTGTTCGTGT AGTAACGATG
GGTGACTTCA GTAAGGAATT ATGTGGTGGT ACCCACGTAG CTAACACAGG TTCTATCACT
GTATTTAAGA TCTTATCAGA AGCAGGTATT GCGGCAGGAG TACGTCGTAT TGAAGCGATT
ACATCTAACG CAGTATTTGA ATACTATAAG TCAATGGAAG AAGAGCTTCA TGAGGCTGCA
AAAGTAGCAA AGACAGAGCC AGCTTCCTTA GTAAAGAGAA TTGAAAGCTT ACAAGAAGAG
TTAAAGACTG CATTATCTGA AAATGAGAAA TTAAAGGCTA AGCTTGCAAA TAATTCTTTA
GGCGATGTAA TGAATCAGGT AGTTGAGGTA AAGGGTGTGA AGCTCTTAGC TTCTAAGGTA
ACAGATGCTG ATATGAATGG ACTTCGTAAC CTTGGAGACC AGTTAAAAGA AAAATTAGGT
GAATGTGTTA TTCTTTTAGC TTCTGCGAGT GAAGACAAAG TTAATCTTAT TGCGATGGCA
ACCGATGGTG CTATGGCAAA GGGTGCTCAT GCTGGTAACT TAATTAAGGA AGTTGCTGTT
TTAGTTGGTG GTGGCGGCGG TGGTCGTCCA AATATGGCAC AGGCAGGTGG AAAGAATCCA
TCTGGAATTG ATGCAGCAAT CGAAAAAGCG GTGTCTGTTG TGGAAAATCA GATTAAGTAA
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| Protein sequence | MKVYGVNELR KMYLDFFESK GHLKLNSFSL VPQNDKSLLL INSGMAPLKP YFTGQEIPPK
KRVTTCQKCI RTGDIENIGK TARHGTFFEM LGNFSFGDYF KHEAIAWSWE FLTEVVGLSG
DRLYPSIYLE DDEAFDIWNK EVGIAPERIF RMGKADNFWE HGAGPCGPCS EIYYDRGEKY
GCGDPNCTVG CECDRFIEVW NNVFTQFNSD GNGNYEELEN KNIDTGMGLE RLAVVVQDVD
TLFDIDTMKA IRDHVCKMAN AEYKVDPKKD MSIRLITDHI RSVTFMTSDG IIPSNEGRGY
VLRRLLRRAA RHGRLLGIQG KFLAELSKTV IAESKDGYPE LEEKKEYILK VLTIEEEKFN
KTIDQGLSIL SEMEEALVSN GTKTLNGEDA FKLYDTYGFP LDLTKEILEE KGFSIDEEGF
KKAMQVQRET ARSARAVTNY MGADASIYDE IDPAITSNFV GYDRTSHTSK ISVLTTETDL
TDEVVGGQTA TIIVDETPFY ATMGGQTADI GFIVGKDAEF EVEDTIKLKG GRVGHLGTVT
KGSFKVGETV TLTIDTQKRQ AIGKNHSATH LLQKALRNVL GSHVEQAGSF VTSERLRFDF
THFSALTKEE IAKVEAMVNE EIAKNVPVVT DVMSVEDAKK SGAMALFGEK YGDSVRVVTM
GDFSKELCGG THVANTGSIT VFKILSEAGI AAGVRRIEAI TSNAVFEYYK SMEEELHEAA
KVAKTEPASL VKRIESLQEE LKTALSENEK LKAKLANNSL GDVMNQVVEV KGVKLLASKV
TDADMNGLRN LGDQLKEKLG ECVILLASAS EDKVNLIAMA TDGAMAKGAH AGNLIKEVAV
LVGGGGGGRP NMAQAGGKNP SGIDAAIEKA VSVVENQIK
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