| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2548 |
|---|
| Symbol | |
|---|
| ID | 5741826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3116259 |
|---|
| End bp | 3117548 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293638 |
|---|
| Product | GTP-binding protein Obg/CgtA |
|---|
| Protein accession | YP_001559648 |
|---|
| Protein GI | 160880680 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.040032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCAG ATAGTGCAAA AATTTTTATA CGCTCCGGAA AAGGTGGCGA TGGACATGTT
TCTTTCCGTC GTGAAATCTT TGTCCCTGCC GGCGGTCCTG ATGGAGGAGA CGGTGGTAAG
GGTGGAAATG TTATATTTGA AGTTGATGAA GGTTTAAATA CTCTTGGAGA CTTCCGTTTA
AAGAGAAAGT ATTCTGCCGG TGATGGTGAA AACGGTCAAA AGAAACGTTG CTCTGGTAAA
GATGGTGAAG ATTTAATCAT TAAAGTTCCA GAAGGTACCA TTATTAAGGA AACAGAAACG
GGTAAAGTTA TCACCGATAT GTCACATGAA AATCGTAGGG AAGTAATACT TCGCGGTGGT
CGTGGTGGTA AGGGAAATCA ACATTATGCA ACTCCAACAA TGCAGGTACC AAAATATGCT
CAGCCAGGAC AAAAGGCGAT GGAACTAAAT GTTACGTTAG AGCTTAAGGT AATCGCAGAC
GTTGGCTTAG TAGGATTCCC GAACGTAGGA AAATCTACAT TATTATCACG AGTTACCAAC
GCAAAACCTA AGATTGCAAA CTATCATTTC ACTACACTAA ATCCCAATCT TGGTGTTGTA
GATTTAGATG GTGCGGATGG TTTTGTTATT GCTGATATTC CAGGATTAAT TGAGGGTGCT
TCCGAGGGAA TTGGTTTAGG ACATGAGTTC TTAAAACACA TTGAGCGAAC AAGGGTAATT
ATACATCTTG TAGATGCTGC ATCAACCGAG GGTAGAGATC CAGTGGAAGA CATTGAGAAA
ATCAATCATG AATTATCCTC CTATAATGAA GGATTATTAT TAAAACCACA GGTAATAGCA
GCAAATAAGA CTGATGTTTT ATATGGCGAA GAGGAAGAGG AAGCAATAAA TAAAATCAAA
GAAGCTTTCG AATCAAAGGG AATTAAGGTA TTTCCAATCT CTGCAGTTAG CGGACAAGGA
GTTAAGGAAT TACTTTATTA TGTAAGTGAT TTATTAAAAA CTGTTGATGC TACACCAATT
GTATTTGAAA AGGAATACTT CCCAGAAGAG AATTTAGTGA TGAGTGAGCC TTATACAGTT
GAGTATAATG AAACGGAAGA AGTGTATGTA GTAGAAGGTC CTCGTATTGA AAGAATGCTT
GGATATACTA ACATAGATAC AGAAAAAGGA TTTGAGTTCT TCCAGAAGTT CTTAAAAGAA
AATGGTATCT TAGATCAGTT AGAGGAGTTA GGAATTGGGG AAGGCGATAC AGTACGTATG
TATGGTCTTG AGTTCGACTA CTACAAATAA
|
|---|
| Protein sequence | MFADSAKIFI RSGKGGDGHV SFRREIFVPA GGPDGGDGGK GGNVIFEVDE GLNTLGDFRL
KRKYSAGDGE NGQKKRCSGK DGEDLIIKVP EGTIIKETET GKVITDMSHE NRREVILRGG
RGGKGNQHYA TPTMQVPKYA QPGQKAMELN VTLELKVIAD VGLVGFPNVG KSTLLSRVTN
AKPKIANYHF TTLNPNLGVV DLDGADGFVI ADIPGLIEGA SEGIGLGHEF LKHIERTRVI
IHLVDAASTE GRDPVEDIEK INHELSSYNE GLLLKPQVIA ANKTDVLYGE EEEEAINKIK
EAFESKGIKV FPISAVSGQG VKELLYYVSD LLKTVDATPI VFEKEYFPEE NLVMSEPYTV
EYNETEEVYV VEGPRIERML GYTNIDTEKG FEFFQKFLKE NGILDQLEEL GIGEGDTVRM
YGLEFDYYK
|
|---|
| |