| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2540 |
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| Symbol | |
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| ID | 5741818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3110347 |
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| End bp | 3111657 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293630 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001559640 |
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| Protein GI | 160880672 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.341654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTC ATAAAGTGAA ACAGATAAAT GGTACCCTCA CCGTACCAGG TGATAAGTCC
ATCTCACACC GTGCAGTTAT GTTTGGAGCT ATAGCAGAAG GAACTACAGA AGTTTATAAT
TTCTTAAAAG GTGCTGACTG TCTCTCAACC ATACAGTGTT TTAGACAGCT GGGAATCAAT
ATAGAAGAAG ATACTAAACA GCAAGTGATT CGAATTCACG GAAAAGGACT TCATGGATTA
ACTCCACCTT CTACTATTCT TGATGTAGGT AATAGTGGAA CGACGCTCCG TCTTATTTCT
GGAATATTAA GTGGTCAACC ATTTGAAAGT AACATTACCG GTGATAGTTC TATACAAAAA
CGGCCAATGA ATAGAGTTAT TACACCTCTA AGCCTAATGA ATGCTGATAT TAAAAGTGTT
CTAGGAAACG GTTGTGCACC ACTCTGCATT AATGGATCCT ATCAAAACGG CGCAAAGTCT
GCCTTAAAGA GTATTCATTA TAATTCTCCT ATTGCCTCTG CACAAGTTAA ATCTTCTATT
CTTTTAGCAG GTCTATATGC AGAAGGTGAA ACTTCAGTAA CTGAGCCATA CGTTTCGAGG
AATCATACCG AACTTATGTT ACAAAAATTC GGTGCAAATC TTAGCGTAAA CGACAAAACA
GTAACTATTC AACCTGAACC AAGGTTAATG GCACAAAAAG TTCATGTACC AGGAGACATC
TCTTCTGCCG CTTATTTCCT TGCTGCTGCT TGTATACTCC CTAATTCTGA ACTTGTTATA
AATAATGTAG GTGTAAATCC TACACGTGAT GGAATCATCG ATGTCTTGCT TGCGATGGGT
GCTGACATTA CGAAAGAAGA TTTAAAGAAT CAAGAAGGTG AAGCAGTATG CAATCTAAGG
GTTAGAAGCA GTAAACTTCA TGGCACTGTG ATTGAAGGAA GTATCATCCC TCGTCTTATT
GATGAGATAC CTGTTATCGC TGTTGTTGCA TGTTTTGCAG AAGGCGATAC AATCATCAAA
GATGCAGCCG AATTAAAGGT GAAAGAGTCC AATCGTATTG ATGTAATGGT ACAACAACTG
AAACATATGG GCGCTAATCT TACTGCAACC GAAGATGGTA TGATTATTCA CGGAGGCCAA
AAGCTATCTG GTACTGTCAT CGAAAGTAAA GAAGATCATC GTATTGCAAT GTCTTTCGCT
ATTGCAAGCC TAATGGCCGA AGGCGAAACG ACTATTCAAG GTGCAGAATG TGTTAACATC
TCCTATCCAG AATTTTATCA AGATTTGTAT AGACTAACCT GCGATAATTA G
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| Protein sequence | MKFHKVKQIN GTLTVPGDKS ISHRAVMFGA IAEGTTEVYN FLKGADCLST IQCFRQLGIN
IEEDTKQQVI RIHGKGLHGL TPPSTILDVG NSGTTLRLIS GILSGQPFES NITGDSSIQK
RPMNRVITPL SLMNADIKSV LGNGCAPLCI NGSYQNGAKS ALKSIHYNSP IASAQVKSSI
LLAGLYAEGE TSVTEPYVSR NHTELMLQKF GANLSVNDKT VTIQPEPRLM AQKVHVPGDI
SSAAYFLAAA CILPNSELVI NNVGVNPTRD GIIDVLLAMG ADITKEDLKN QEGEAVCNLR
VRSSKLHGTV IEGSIIPRLI DEIPVIAVVA CFAEGDTIIK DAAELKVKES NRIDVMVQQL
KHMGANLTAT EDGMIIHGGQ KLSGTVIESK EDHRIAMSFA IASLMAEGET TIQGAECVNI
SYPEFYQDLY RLTCDN
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