Gene Cphy_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2514 
Symbol 
ID5742585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3087152 
End bp3088357 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content39% 
IMG OID641293604 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_001559614 
Protein GI160880646 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG TATATTCCGT AACTCAAGTA AATAACTATA TCAAAAATAT GTTTGTAAAA 
GACTATGTCC TGAATCGTAT CTATATGAAG GGAGAAGTAT CGAACTGTAA GTATCATACG
TCTGGACATA TCTATTTTAC GTTAAAGGAT GAGACGGGTC AGATGGCGTG TGTATTGTTT
GCGGGCTATC GAACTGGTCT TCCTTTTCGC TTGGAAGAAG GGCAAAGTGT TATCGTCCTT
GGTAGCATCA GTGTTTATGA GCGCGATGGA AAATACCAGT TGTACGCAAA AGAAATTAAA
CTGGATGGTC TAGGGCTTTT ATACGAGCGC TTTGAACTAT TAAAACGTAA GCTTAACGAG
GAAGGTCTAT TTGATCCAAG TCATAAGAAG ACACTCGTAC CATATCCAAG GACAGTAGGA
ATTGTAACAG CAAGTACTGG TGCAGCAATT CAAGATATTA TTAACATAAG TAAGAGAAGG
AACCCTTATG TACAATTAGT ATTATATCCT GCTAAAGTAC AAGGTGAGGG AGCTGCCAAA
ACGATTGTAG CCGGAATTAA GGCACTTGAG GCCAAAGGTG TGGATACCAT TATTGTTGGG
CGTGGCGGTG GCTCTATTGA AGATTTGTGG GCTTTTAATG AAGAAATGGT TGCTCGCGCT
ATTTTTGATT GCAGTATACC AATTATCTCT GCTGTAGGAC ATGAAACAGA TATTACAATT
TCAGATTTTG TGTCCGATTT AAGAGCACCA ACTCCGTCTG CAGCAGCGGA GCTTGCAGTA
CCTGAGATTG AAAGTTTATT ATCGAATTTA GTAGATTATC ATTATTCCCT TGTGCAGTGT
GTAATGAGAA AGATTACGAT GGCTAGATCA GAGCTTGAGA AAAAGCAGTT ACAATTAACG
CATCTAAGCC CTGTATATGC ACTGCGGCAA AAACGACAAT ATACAATTGA TTTAGAAAAT
AAGTTAAGAC AGCGAATGAA TGAATTAATA AGATATAAAC GACATTTGCT GGATATTCAA
ATAGAACGAT TAAAAGCAGC CTCACCGCTT GATAAGTTAA AAAGCGGGTT TTCCTATGTA
TCAGATAGCT CTGGCAAGGT GGTAAATAGT ATTACGAAAA CAAAGCCTGG TGACGAGCTA
ACAATCGCTG TAACAGATGG AATGATTAAA GCAAAGACAA TAGGGGTAGA ATCGATAGAA
AGGTAG
 
Protein sequence
MEQVYSVTQV NNYIKNMFVK DYVLNRIYMK GEVSNCKYHT SGHIYFTLKD ETGQMACVLF 
AGYRTGLPFR LEEGQSVIVL GSISVYERDG KYQLYAKEIK LDGLGLLYER FELLKRKLNE
EGLFDPSHKK TLVPYPRTVG IVTASTGAAI QDIINISKRR NPYVQLVLYP AKVQGEGAAK
TIVAGIKALE AKGVDTIIVG RGGGSIEDLW AFNEEMVARA IFDCSIPIIS AVGHETDITI
SDFVSDLRAP TPSAAAELAV PEIESLLSNL VDYHYSLVQC VMRKITMARS ELEKKQLQLT
HLSPVYALRQ KRQYTIDLEN KLRQRMNELI RYKRHLLDIQ IERLKAASPL DKLKSGFSYV
SDSSGKVVNS ITKTKPGDEL TIAVTDGMIK AKTIGVESIE R