| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2512 |
|---|
| Symbol | |
|---|
| ID | 5742583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3085890 |
|---|
| End bp | 3086897 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293602 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001559612 |
|---|
| Protein GI | 160880644 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGG ACACTAACAT AGAAGAAAAG CTTCATCAAA AAGCGGAAAC GTTTGCCCAG
ATGATGACAG CATATCTTCC AAAGGAACAA GGACAGCAAA AAACAATATT TGATGCGCTC
TCCTACAGTT TGTTAGCAGG TGGAAAAAGA ATAAGACCAA TTATTCTATT AGAAACTTAT
CAAGCATTGA AAGAACAAGA GAAAGGGGGA GCTTTGCGCG CTTCCCAACT GGATATTATA
AATGAGAATG CGGATTTTTC TTGGTTTAAA ACCTTAGATG ACATTGTTAC TAAGTTTTCC
GTAGCTTTAG AAATGATTCA TACGTATTCT CTTGTACATG ATGATTTACC TGCTATGGAT
AATGATGAGT ATCGCCGTGG TAAGCTTACT ACCCATGCAA AATATGGTGA GGACATGGGG
ATATTAGCTG GAGATGCTTT ATTAAATGGA GCATTTGAAT TAGTAGCAGA AGCATTTGCT
AACATAAAGG ATATTGAGAA TAGCACAGAT GCAATCACCC TTTATGATCG AGTTTCACGA
GCGTATCAGA TGTTATCAAG TAGATCTGGA ATGTATGGTA TGATTGGTGG ACAAGTCGTT
GATGTGGAGC GCACAGGTTC CGTCCTTTCG AAAGAAGAAT TACTTTTTAT ATATGAGTTA
AAGACAGGTG CCCTTTTAGA GGCTTCTTTT CTAATTGGTG CAATACTTTC GGGAGCGAAT
CAAGAGGAGC TTATTCGCTT TACAAAGATT GCGAAAAAAG TTGGTTTAGC ATTTCAGATT
CAAGATGATA TCTTAGATGT AACTAGTACG ATGGAAGTAT TAGGGAAGCC AATCAATAGT
GATGAGAAAA ATCAAAAAAC AACGTATGTT ACCCTTTATG GTATAGAAGA TAGTAAAAAA
GAAGTAGAGC GTTTATCAAA AGAAGCTATG GAGGAATTGA AAGCCTTAAA GCTTGAAAAT
AGTTTTTTAA CAGAATTAGT TTCTTATCTA GTGAATCGAG AAAAATAG
|
|---|
| Protein sequence | MIADTNIEEK LHQKAETFAQ MMTAYLPKEQ GQQKTIFDAL SYSLLAGGKR IRPIILLETY
QALKEQEKGG ALRASQLDII NENADFSWFK TLDDIVTKFS VALEMIHTYS LVHDDLPAMD
NDEYRRGKLT THAKYGEDMG ILAGDALLNG AFELVAEAFA NIKDIENSTD AITLYDRVSR
AYQMLSSRSG MYGMIGGQVV DVERTGSVLS KEELLFIYEL KTGALLEASF LIGAILSGAN
QEELIRFTKI AKKVGLAFQI QDDILDVTST MEVLGKPINS DEKNQKTTYV TLYGIEDSKK
EVERLSKEAM EELKALKLEN SFLTELVSYL VNREK
|
|---|
| |