Gene Cphy_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2486 
Symbol 
ID5742557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3051547 
End bp3053694 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content37% 
IMG OID641293576 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_001559586 
Protein GI160880618 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAC CTGGAATGTT TATCAGTGAC AGATATGAAA TTGTAGACAG AGTTGGTTCT 
GGAGGAATGG CGGATGTTTA CAAAGCAAAA TGTCATCGGT TAAATCGATA TGTAGCAATT
AAAATATTGA AACCGGAATA TTCAAGTGAT AAGAATTTTG TAACGAAATT CCGTGGAGAA
GCTCAATCTG TAGCGGGCTT ATCTCATCCG AACATAGTAA ATGTCTATGA TGTAGGTGAT
GACGATGGAT TATATTATAT CGTTATGGAG CTTGTGGAAG GAATTACGTT AAAGAAATTT
ATTGAACGTA AAGGAAAGTT AGAAGTAAAA GAGGCAGTTG GAATTGCGAT TCAGATAGCG
CAAGGTATGG AGGCTGCTCA TGACAATCAC ATTATTCATA GGGATATTAA ACCACAGAAT
ATCATTATAT CCAGAGATGG TAAAGTAAAA GTAACAGACT TTGGTATAGC TAAGGCTGCA
TCTACGAATA CTGTTACTCA GAATGCGATT GGTTCTGTTC ATTATTTATC ACCAGAACAG
GCAAGAGGCG GATACAGCGA TGAGAGAAGT GATATCTATT CTCTTGGTGT AACAATGTAT
GAAATGTTAA GTGGTGAAGT ACCATTTGCA GGAGACAATA CGGTATCCGT TGCACTTCTT
CATATTCAAG GAGAGGCTAC CCCTCTTCGT GAATTAAATC CAGATGTACC GGTAAGTCTT
GAGAGAATTG TACAAAAATG TATGCAGAAG AAGCCAGAGA GAAGATATAT ATCTGCTTCT
GAATTAATCA GTGACTTAAA ACGCTCTATC ATAAATAAAG ATGGAGATTA TGTAGTTATT
AATAATGGTG TAGTTAGTGA TTCTCCAACC ATCACTTTAT CAGATGATGA GATGAATCAT
ATTAAAAGTG CCGCTAAAAC ACCAGTAACA TTTATTGATA ACAATGCAAA GGATAAGGGA
ACAAAAAAAG TTTCCAAAGA GGAAGAAGAG GAACTTGATT CCGTAGACTC AAAAATGGAG
AAAGTACTCA TTATCTCCAT GATAGCGGCA GCTGTTTTGG TAGGCTGTAC GGTATTATTT
ATTGTAGCGC GTTTCTTTAA TATATTTGAT TGGGGCAAGG GCAATAAGGA TACAGATATT
ACTCCAGTAC CATCCATTAC TGTAACTGTT TCACCAGAAC CAACAGAAGA GCCAGTAGCT
GATCTTGTAA AAGTTCCAGA GGTAAGAGGC CTTGATAGAG ACACAGCAAT TAGTAGTCTT
ACGCTTGCAT CACGTTTATT TAATGTCACG TTGGCGGATG AAAAAGAATA CTCAGATGAG
TATGAAGAAG GCTTAGTTAT GAATCAAAAT TATCCTGCTG GTACTGAGAT TCCATCGAAT
TCAACAATTA TCTTAACCAT TAGTGCTGGT GCTCAACCTG TTGAATTAAT CGATGTTTAT
AATCGAAGTT ACGAACAAGC AAGGAAACAA TTAGAAGACT TAGGTTTTAA GGTGGAACGT
AAAGATGAGG CAAATAGTGA TATAGGTGCT GAATTCGTTA TCCGGACAAC TCCAGAAAGA
GCGACAGATC CTAAGAATCC AGTCATGTTA AAGAAAGGTT CCACGGTAAC TTTAGTAGTA
AGTACAGGAC CGGATGTAAG TGCGTTAAAA AAAGTACCAA ATCTACTTGG TAAGACGGAA
GAACAGGCAA AACAAGCATT ATTAGAAGCA GGTCTTCAAA AAGGAGTAAC TTCCAATATT
CCAAGTTCTG AATATGCAAA GGGAGCTGTA TGCTATCAGA ATACAACAGC TGGAGAATTA
GTAACAGCAG ATACTAAAAT TGATATCTCT ATTAGTACTG GTGTTGAAAG TACACCAACT
CCTGACGTTT CACTTCCTGA TGAATATGGC TATTTTGGAA AAGTTACAAT TACAGAAAAT
CCGTTTGAAG AAGGCGAATC AGGTGATGTT TATCTTGAGC TTGAGCAAGA TGGAGAATCA
ATGCTGATTA TGCAAAAATA TTTGTCGTAT GATGATTTTC CAAAAGCGTT AAAAAATATT
AAAGTGGAAG GTATACGAGA AGGTGATGGT ATCGTAAGAA TGTATATTGA CGATGTACCG
TACGGCAGTT CTTGGAGCGT ATTCCTAAGC GCAGAGAAGA AAAAGTAA
 
Protein sequence
MIKPGMFISD RYEIVDRVGS GGMADVYKAK CHRLNRYVAI KILKPEYSSD KNFVTKFRGE 
AQSVAGLSHP NIVNVYDVGD DDGLYYIVME LVEGITLKKF IERKGKLEVK EAVGIAIQIA
QGMEAAHDNH IIHRDIKPQN IIISRDGKVK VTDFGIAKAA STNTVTQNAI GSVHYLSPEQ
ARGGYSDERS DIYSLGVTMY EMLSGEVPFA GDNTVSVALL HIQGEATPLR ELNPDVPVSL
ERIVQKCMQK KPERRYISAS ELISDLKRSI INKDGDYVVI NNGVVSDSPT ITLSDDEMNH
IKSAAKTPVT FIDNNAKDKG TKKVSKEEEE ELDSVDSKME KVLIISMIAA AVLVGCTVLF
IVARFFNIFD WGKGNKDTDI TPVPSITVTV SPEPTEEPVA DLVKVPEVRG LDRDTAISSL
TLASRLFNVT LADEKEYSDE YEEGLVMNQN YPAGTEIPSN STIILTISAG AQPVELIDVY
NRSYEQARKQ LEDLGFKVER KDEANSDIGA EFVIRTTPER ATDPKNPVML KKGSTVTLVV
STGPDVSALK KVPNLLGKTE EQAKQALLEA GLQKGVTSNI PSSEYAKGAV CYQNTTAGEL
VTADTKIDIS ISTGVESTPT PDVSLPDEYG YFGKVTITEN PFEEGESGDV YLELEQDGES
MLIMQKYLSY DDFPKALKNI KVEGIREGDG IVRMYIDDVP YGSSWSVFLS AEKKK