| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2469 |
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| Symbol | |
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| ID | 5742540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3031435 |
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| End bp | 3032175 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293559 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_001559569 |
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| Protein GI | 160880601 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000130703 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTATTAA AAATCACAAT CCAAAATAAA TTTCAGTTCC GTATGATACC AAGTTTTCGT
GAGTTATTCT TGAAGAAAAA AGGGGAAATT CACTATATTG GGGGTGCTGA AGTTTTGCCG
GCTCCTTTGG ATGCCAAGAG AGAAGCAGAT GCAATTATGA AACTTGGTAC ACCGGATGAT
GTGGAGGCGA AATCATTACT AGTAGAACAT AACTTAAGGC TGGTAGTTTA CATAGCAAAA
AAATTTGATA ATACAGGCGT AGGGGTAGAG GATTTAATCT CAATAGGGAC GATTGGGCTA
ATTAAGGCGA TAAACACGTT TAATCCGGAT AAAAATATTA AATTGGCTAC TTATGCCTCT
CGTTGCATCG AAAATGAAAT CCTGATGTAT TTACGTAGAA ATAGTAAAAC AAAGCTTGAG
GTATCTATTG ATGAGCCGCT TAATGTAGAT TGGGACGGTA ATGAATTGTT ATTGTCTGAT
ATCCTTGGTA CGGAGGAAGA TGTAATATAC AAAAACATAG AAGACGAAGT CGATAAGAAA
CTCCTTGGTA GAGCACTTTC TAAATTAAAT GACCGTGAAA AAATTATAGT TTCGTTACGA
TTTGGTTTAA ACACTGCAGA TGGTAACGAA CGTACACAAA AAGAAGTGGC AGATATGCTA
GGGATTTCGC AGTCTTATAT TTCTCGTTTG GAGAAGAAGA TAATTAAGCG TTTAAAAAAG
GAAATGCTAC GATGTGAATA A
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| Protein sequence | MLLKITIQNK FQFRMIPSFR ELFLKKKGEI HYIGGAEVLP APLDAKREAD AIMKLGTPDD
VEAKSLLVEH NLRLVVYIAK KFDNTGVGVE DLISIGTIGL IKAINTFNPD KNIKLATYAS
RCIENEILMY LRRNSKTKLE VSIDEPLNVD WDGNELLLSD ILGTEEDVIY KNIEDEVDKK
LLGRALSKLN DREKIIVSLR FGLNTADGNE RTQKEVADML GISQSYISRL EKKIIKRLKK
EMLRCE
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