| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2409 |
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| Symbol | |
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| ID | 5742479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2963227 |
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| End bp | 2964591 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641293499 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001559509 |
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| Protein GI | 160880541 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000225745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTG AAAGCTTATC AGAAAAATTG CAAAATGTGT TTAAAAACCT CCGTGGCAAA
GGAAAGCTTT CTGAGGCGGA CGTTAAGCTA GCATTACGGG AAGTTAAGAT GGCACTTTTA
GAAGCGGATG TTAACTTTAA GGTTGTTAAA AACTTTGTAA ATTCAGTACA GGAAAGAGCG
ATTGGTCAAG AAGTTATGAC TAGTTTAACT CCTGGCCAGA TGGTTGTAAA AATCGTAAAT
GAAGAGATGG TCAAACTCAT GGGAGATGAG ACCACCGAAC TTACCTTAAA ACCTGGTAGC
GAAATCACAG TTATTATGAT GTGTGGTCTT CAGGGTGCTG GTAAAACGAC GACGATTGCA
AAACTTGCCG GTAAATTTAA AGCAAAAGGC AAGAAACCAT TATTAGTAGC ATGTGATATT
TATCGTCCTG CTGCGGTAGA TCAGTTACAG ATTAACGGTG AAAAACAAGG TGTTCCTGTA
TTCGCTATGG GAACGAATCA TAAACCTGTG AACATTGCAA AAGCGGCAAT GGAGCATGCG
GCAAAGAATG GCAATAATAT CGTAATTATC GATACTGCCG GTCGTCTTCA CATTGATGAA
GATATGATGG ACGAGTTGAT TGAGATAAAA GAAAATATTC ATATCGATCA CGTAATCCTC
ACAGTTGACG CAATGACAGG TCAGGATGCT GTAAATGTAG CGGAAACTTT TAATGAGAAA
ATTGGTATAA CCGGAGTAAT TCTTACAAAG CTCGATGGTG ACACCCGTGG TGGTGCTGCT
TTATCCATTC GTGCAGTAAC CGGAAAACCT ATTCTATACA TTGGTATGGG AGAGAAGCTC
TCTGATTTGG AACAGTTTTA TCCAGATCGT ATGGCGAGCA GAATCCTTGG TATGGGTGAT
GTGCTTACCC TGATTGATAA AGTTCAAGCA GAAATTGATG AAGACAAGGC AAAAGAGCTG
GAACGAAAAA TCAAAAAAGC AGAATTTGAT TTCAACGATT ATCTAGACCA GATGCAACAG
ATGAAGAAGA TGGGTGGAAT TCAGAAATTG GTTGAGATGT TACCAGGCGG TATGGGTGGC
ATGGGAAGCA AAGCCAATAT GAAAGACATT GACTGGGATG AAGGAGAAAA TGCTCTAAAG
GGCATCGAAG CCATCATTTA CTCCATGACA AAGGAAGAAC GTCGTAATCC AGACCTTCTT
AATCCATCCC GTAAGAAACG TATTGCTGAT GGAGCTGGCG TTGATATTAG TGAGGTAAAC
CGTGTAGTGA AACAATTCGG TGAAACTCGT AAGATGATGA AACAGTTTTC TGGTATGCTT
GGAGGAAAGA ACAAGAAGAA ATTCCGCATG CCATTTGGAC TGTAA
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| Protein sequence | MAFESLSEKL QNVFKNLRGK GKLSEADVKL ALREVKMALL EADVNFKVVK NFVNSVQERA
IGQEVMTSLT PGQMVVKIVN EEMVKLMGDE TTELTLKPGS EITVIMMCGL QGAGKTTTIA
KLAGKFKAKG KKPLLVACDI YRPAAVDQLQ INGEKQGVPV FAMGTNHKPV NIAKAAMEHA
AKNGNNIVII DTAGRLHIDE DMMDELIEIK ENIHIDHVIL TVDAMTGQDA VNVAETFNEK
IGITGVILTK LDGDTRGGAA LSIRAVTGKP ILYIGMGEKL SDLEQFYPDR MASRILGMGD
VLTLIDKVQA EIDEDKAKEL ERKIKKAEFD FNDYLDQMQQ MKKMGGIQKL VEMLPGGMGG
MGSKANMKDI DWDEGENALK GIEAIIYSMT KEERRNPDLL NPSRKKRIAD GAGVDISEVN
RVVKQFGETR KMMKQFSGML GGKNKKKFRM PFGL
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