| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2401 |
|---|
| Symbol | |
|---|
| ID | 5742471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2956618 |
|---|
| End bp | 2957496 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293491 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_001559501 |
|---|
| Protein GI | 160880533 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00457359 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTC AGTGGTACCC AGGACATATG ACGAAAGCAA AACGTCAGAT GCAAGAAGAT
ATAAAATTAA TAGATGTTGT AATAGAACTG GTGGATGCCA GAATCCCATA TAGCAGTAAA
AATCCAGATA TTGATGATTT AGCAAAAAAT AAATCAAGAA TTATCTTGTT AAATAAATAT
GATTTAGCAG ATCAGAAAAT GACCGATGCT TGGAAATCAT ATTATGAGAA AAAAGGTTGG
TTTGTTGCTC TTGTTAATTC CAGAAACGGT AGCGGTGTTA AGAATGTACA TGAGGTGATT
AAGCAGGCTT GCCAGGAGAA AATAGAACGA GACCGTAAGC GTGGAATCTT AAATCGTCCA
ATTCGTGCGA TGATTGTAGG AATACCGAAT GTAGGTAAGT CAACTTTTAT TAATAGTTTT
GCTGGAAAAG CCTGTACAAA AACAGGGAAT AAACCAGGTG TTACAAAAGG AAAGCAATGG
ATTAAATTAA ACAAAAATGT TGAACTATTA GATACTCCAG GTATTCTCTG GCCGAAGTTT
GAAGATCAAG TAGTTGGTAT GAGAATAGCC TTTATCGGTT CCATCAATGA TGATATCCTA
AATCCAAGAG ATTTATGTTA CGAGCTTATC GAATACCTTC ATCGTGTATA CCCAGGTGTC
TTAGGTGAGA AATATGGCAT GGAAGAGGTG GATAGTAACA TAGAGAATCT CGATCTAATT
GCCAAGAAAC GCGCCTGTTT ATTAAAGGGT GGAGAGCTTG ACTTAGTAAA GGCTGCTAAT
TTTGTATTAG ATGATTTTAG AAATGGACGT ATTGCCCGTA TAACGCTGGA ACATCCAAGT
GAACGTATGG AAGTTAACGA AGAAGAAAAG AAGGATTGA
|
|---|
| Protein sequence | MHFQWYPGHM TKAKRQMQED IKLIDVVIEL VDARIPYSSK NPDIDDLAKN KSRIILLNKY
DLADQKMTDA WKSYYEKKGW FVALVNSRNG SGVKNVHEVI KQACQEKIER DRKRGILNRP
IRAMIVGIPN VGKSTFINSF AGKACTKTGN KPGVTKGKQW IKLNKNVELL DTPGILWPKF
EDQVVGMRIA FIGSINDDIL NPRDLCYELI EYLHRVYPGV LGEKYGMEEV DSNIENLDLI
AKKRACLLKG GELDLVKAAN FVLDDFRNGR IARITLEHPS ERMEVNEEEK KD
|
|---|
| |