| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2379 |
|---|
| Symbol | miaA |
|---|
| ID | 5742449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2930644 |
|---|
| End bp | 2931585 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641293469 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_001559479 |
|---|
| Protein GI | 160880511 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAACCAT TGGTCATTCT AACAGGACCG ACGGCAGTTG GAAAAACAAA ATTATCGATT
GATTTAGCAA AAAGTATCAA TGGAGAAATC ATATCTGCTG ATTCCATGCA GGTGTATCGC
CATATGGACA TCGGAACAGC AAAAATCACA CCAGAAGAGA TGGAAGGTGT GACACATTAT
CTTGTGGATG AATTTGAGCC AGACGAAGAA TTTAACGTGG TTAAGTTTAA GGACTGTGCA
AAGGAAGCAA TTAGAGAGAT CTATTCAAAA GGAAAGGTCC CGATTATCGT AGGGGGAACT
GGTTTTTATA TACAAGCAGT CCTAAAGGAC ATAGATTTTA CAGAAAATGA TTCGGATACA
CCGTATCGGA AAGAACTTGA GGAGCTTGCT CAAACAGAGG GTGCGATAAA ATTACACGAT
ATATTAAAGC AATGTGATCC AGTAGCAGCC GAAGCTATTC ATCCTAATAA TATAAAACGT
ACGATAAGGG CAATAGAGTA TTTTAAATTA ACAGGGGAAC CAATATCAAA ACATAATGAG
GAGCAAAGAG GGAATGAATC ACCTTACCAA TATGCCTATT TTGTTTTAAA TAATGACCGT
GAAATTCTGT ATGAAAACAT CGATCTTCGA GTGGATAAGA TGCTTGATGC AGGTTTGGTA
AAGGAAGTCC TTTGGTTAAA AGAACAGGGA TATGATCGCT CTCTTGTTAG TATGCAAGGA
TTAGGTTATA AGGAAATCTA TGCCTATCTG GAGGGGGAAT GTTCTCTTGA GGAGACAGTT
TATTTATTAA AAAGAGACAC CAGACATTTT GCTAAGAGAC AGCTTACTTG GTTTAAACGA
GAGCAGGATG TAATCTGGTT ATCGAAAAAA GATTATAACA GTGATGCCAG CATCCTTACC
GAGATGGTAA AGATATTAAC AGAAAAAGAA ATCATAAAGT AG
|
|---|
| Protein sequence | MQPLVILTGP TAVGKTKLSI DLAKSINGEI ISADSMQVYR HMDIGTAKIT PEEMEGVTHY
LVDEFEPDEE FNVVKFKDCA KEAIREIYSK GKVPIIVGGT GFYIQAVLKD IDFTENDSDT
PYRKELEELA QTEGAIKLHD ILKQCDPVAA EAIHPNNIKR TIRAIEYFKL TGEPISKHNE
EQRGNESPYQ YAYFVLNNDR EILYENIDLR VDKMLDAGLV KEVLWLKEQG YDRSLVSMQG
LGYKEIYAYL EGECSLEETV YLLKRDTRHF AKRQLTWFKR EQDVIWLSKK DYNSDASILT
EMVKILTEKE IIK
|
|---|
| |