| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2356 |
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| Symbol | |
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| ID | 5745415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2909309 |
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| End bp | 2910250 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293446 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001559456 |
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| Protein GI | 160880488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.105918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA TAAAAACATG CTGTATAGAC AGTGAGTATG AGGATGAACG CATTGATAGT
TTTCTTGCAG AATTTGAGGA AGGTATTTCT CGTTCCTATA TTCAGAAGTT AATAAAAGAT
TCCCTTGTGA AGATCAATGG TAATGTGATT AAGGCAAATT ACCGTTTAAA AGAAGGGGAT
ATACTAACTT ATGAAGTTCC TCAACCCGTA TCATTAGAGA TAGCAGCAGA GAATATTCCC
CTTGATATTT TATATGAAGA TGAGGATATT ATCGTAATCA ATAAACCAAA AGGATTAGTT
GTTCATCCGG CGGCAGGTCA CTATTCTGGT ACCTTAGTAA ATGCACTATT ATATCATTGT
AAGGATAGAC TATCCGGAAT AAATGGAGTG ATGAGGCCAG GAATCGTTCA TCGTATTGAT
ATGAATACGA CTGGAGTATT GGTTGTTTGT AAAAATGATA AATCTCACCA ATCGATAGCA
GAACAATTAA AGGTACATTC CATTACAAGA AAATATGAAG CGCTTGTCTA TAATTCCTTT
AAACAAACGG AAGGAACAGT AGATGCGCCT ATTGGAAGAC ATCCAGTAGA TCGTAAGAAG
ATGGCAATCA ACCATAAGAA TGGGAAGAAT GCAGTCACGA ACTATCGTGT ATTGGAGAAT
TTTAACCTTG GATATGTACA CAACCAAGGT TATGCTCATA TTGAATGTAC ATTAAAAACA
GGACGTACTC ACCAAATCCG CGTTCATATG GCTAGTTTAC ATCACCCTCT ATTAGGTGAT
GATGTGTATG GACCGGAGAA AGATAAATTT CATCTTGAAG GGCAGGCTTT ACATGCCAGA
GTTTTAGGAT TCCTTCATCC AACTACGCAG GAATATATGG AATTTGAGGC TCCATTGCCC
GAATACTTTC AGCAATTGAT TGAAAAATTG AGGTGTAACT AA
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| Protein sequence | MENIKTCCID SEYEDERIDS FLAEFEEGIS RSYIQKLIKD SLVKINGNVI KANYRLKEGD
ILTYEVPQPV SLEIAAENIP LDILYEDEDI IVINKPKGLV VHPAAGHYSG TLVNALLYHC
KDRLSGINGV MRPGIVHRID MNTTGVLVVC KNDKSHQSIA EQLKVHSITR KYEALVYNSF
KQTEGTVDAP IGRHPVDRKK MAINHKNGKN AVTNYRVLEN FNLGYVHNQG YAHIECTLKT
GRTHQIRVHM ASLHHPLLGD DVYGPEKDKF HLEGQALHAR VLGFLHPTTQ EYMEFEAPLP
EYFQQLIEKL RCN
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