| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2313 |
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| Symbol | |
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| ID | 5745372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2850644 |
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| End bp | 2851681 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293403 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001559413 |
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| Protein GI | 160880445 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000876043 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAG ATGACAGAAA GCTGAAAATT TTACAAGCTA TAATTCGAAA TTATTTAGAA
ACTGGTGAAC CTGTCGGTTC TAGAACAATT TCGAAATATA CGGATTTAAA TTTAAGCTCT
GCAACCATTC GAAATGAAAT GTCTGACTTA GAAGAATTAG GCTACATCAT TCAGCCGCAT
ACCTCTGCTG GACGAATCCC ATCAGATAAG GGGTATCGAC TTTATGTGGA TACCATGATG
GAGGATAAGG TAACTGAGGT CGAAAACATG CGAGATATGT TGCTTGAAAA GGCTGACAAG
ATGGAAACCT TATTACAGCA AGTTGCAAGA CTTCTTGCCG TAAATACGAA TTATGCAACG
ATGGTGACAT CACCGCAATA TCGTTCTAGA AAGGTTAAAT TCCTACAAGT TTCAGAAGTT
GATACGACGC AAATTCTAAC AATAATTGTA CTAGAAGGCA ATATCGTAAA GAATAAGATA
ATTGCAATTG CGGAACCATT AGATAAGGAA ACACTTCTAA AATTAAACAT TGTATTAAAT
ACGTTCCTAC AAGGTTTGGA TTTAAGTGAA ATTAATCTCG CATTAATCCG TCAAATGAAG
GAACAAGCGG CAGAACATAG CTCCGTGGTT AGCGATATTT TAGATGCGGT TGCACAAGCC
ATTAGTGAAG AAGATGATAT TCAGATTTTT ACAAGTGGAG CAACGAATAT TCTTAAATAT
CCTGAACTGA ATGACATGGA GAAAGCCAGC GAATTACTCT ACACTTTAGA GGAAAAAAAG
CAACTGACAA ATCTTATGAA CAATGAGGTT TCCAGTGGTG AGAACCGTGG AATACAAGTT
TACATCGGGA ATGAAACTCC GGTAGACTCA ATGAAGGATT GTGCAGTAGT TACCGCGACC
TATCAAATTG AAGAAGGTGT CTATGGTAAA ATTGGTATCA TTGGCCCAAA GAGAATGGAT
TATGAAAAGG TTGTAAGTAC ACTGCAAAAC CTTATGTGTC AGTTGGATGA TATATTTAAG
AAAGACAATG ATAGATAA
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| Protein sequence | MQLDDRKLKI LQAIIRNYLE TGEPVGSRTI SKYTDLNLSS ATIRNEMSDL EELGYIIQPH
TSAGRIPSDK GYRLYVDTMM EDKVTEVENM RDMLLEKADK METLLQQVAR LLAVNTNYAT
MVTSPQYRSR KVKFLQVSEV DTTQILTIIV LEGNIVKNKI IAIAEPLDKE TLLKLNIVLN
TFLQGLDLSE INLALIRQMK EQAAEHSSVV SDILDAVAQA ISEEDDIQIF TSGATNILKY
PELNDMEKAS ELLYTLEEKK QLTNLMNNEV SSGENRGIQV YIGNETPVDS MKDCAVVTAT
YQIEEGVYGK IGIIGPKRMD YEKVVSTLQN LMCQLDDIFK KDNDR
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