| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2304 |
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| Symbol | |
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| ID | 5745363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2836995 |
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| End bp | 2840126 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293394 |
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| Product | pullulanase, type I |
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| Protein accession | YP_001559404 |
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| Protein GI | 160880436 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type
[TIGR02104] pullulanase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGAA TTATAGTTGG AATGCTAGTT GTTGCCCTTT TGCTTTCGAT GATAGGTGTT
CAGACAAAGA ATGCAAAAGG AGCTACAGAT ACCATTACGA TTCATTATCA TAGGGATGAT
GGCGATTATG AAAAATGGAA TCTGTGGTTA TGGGCAGAAG GAAAAGATGG CGCGGCATAT
TATTTTGATG GAGAAGATGC ATTTGGGCCG TATGTTTCGG TTTCTCTGGA TAAGAGTGCA
GACAGGATAG GGTTTATTGT CCGTACGGAT TCTTGGGAAA AAGATGTTTC GGAGGACCGG
TTTATTGATA CATCACTTGG GGATGAAATC TGGATATCCA GTGGAGAGAG CACATTTTCT
TATGAAGCAC CAGAAGGGTA TGAAAAAGAG GTATCAATAG AATCTTTCCA GCTTAAGCTT
AATTACTTAA GGTATGATGA AGAGTATACG GATATTTCAT TTCGATTAAC CTTTGAGGAT
GGGACGACAG ATTTTCTTAC TAAAGAGCAT ATGCGTATTG AAAATGGTAT ATTAAAAGCA
GAAAAAGAAG TCAAATATGG TAAAAAGATA ACACTTGATG TATTAAAAAA TGGGTTAGAA
GAGGATTATC AAGGTGTTTC TTTTTCTACG GCCAAAATTG ATGAGGAAAG TAAGCTAGAG
ATGTATTGGA TGCAGGGAAC AGGAACTATT TCACCGAAGG CTGACTTTAT CAAGAGAAGT
AAGGAAATTG AATCGGCATT GATTACTTCC ATGAAGGAAA TAACAGTCAA GCTTTCCGTT
CCTTGCAGAG TAGATGATAT CAAGCAGGAT GGATTTAAAC TTTCGCCGAA ATTAGCTGTT
TCCAAGGTGG AAGCGACAAG TACAAGGGAC AGTGAATACA AAACAATCAA GGAAGGATAT
GCAGATACTT TTATTATCAC GATGGAGGAA CCTTTGGATA TGTCAAAGAA ATATGCATTA
TCAAAAACAG ACTATGGAAG CCGGAATTTA ACCCTTGATT CAGGGCTCTA TACCTCAGAA
GAATTTGAAG CCGCCTATAC TTATGAGGGT AATGATTTAG GTGCAACGTA TAGCAAGGAA
AAGACTGTAT TTAAGGTATG GTCACCTTCT GCGGAAAGTA TTTCTGTACT TTTTTATCCG
CATGGAGAAG CCAAAGACGG GGAGAAACCG GAGATAACTT ACCCTATGAA GCAAACTGGC
GCTGGTGTTT GGCAGGCAGA AATAGAAGGA GATTTAAAAA ATAAATATTA TGTATACCAA
GTTACAGTAG ATGGAAAAAC AAAGCTTGTA GTTGATCCCT ATGCAAAAGC GGCAGGTGTA
AACGGTGAGC GAGGTATGGT AATTGATTTA TCTGAAACGG ACCCAGATGG CTTTAGAGAA
CATAGTTCAC CAGAATTTAA AAATCCGGTG GATGCGGTGA TATATGAAAT TCACGTTAGA
GACCTTTCCA TGAATGAAAA CTCTGGAATT GAAAATAAGG GGAAGTTTCT TGGATTTACA
GAAACAGGGA CAACGAATAG TGCTGGTCTT TCTACTGGTC TTGACCATAT GAAGGAACTT
GGTGTCACCC ATGTCCACCT TCTTCCAAGC TTTGATTATA AAACCATTGA TGAGTCGAAA
CTGGGTGAAA ATAAGTTTAA CTGGGGATAT GACCCACAGA ACTATAATCT TCCGGAGGGT
TCTTATACTA CGGATCCTTA TCAAGGGGAA GTACGTGTCA GGGAATATAA GGAGATGGTT
CAGGCTCTGC ATGAAAATGG CCTACATGTA GTTATGGACG TGGTTTATAA TCATACTTAT
ACGGCAGGAG ATTCCAACTT TACATCCTTA GTGCCAGGAT ATTATTACAG AACTGACATA
AACGGAAATT TCACTAATGG CTCTGGTTGT GGTAATGAGA CAGCTTCAGA ACGTGCCATG
GTAAGAAAAT TTATTGTTGA TAGCGTAGTT TATTGGGCGA CAGAGTATAA AGTAGATGGC
TTCCGGTTTG ACTTAATGGG GTTACATGAC ATAGAAACAA TGAACATGGT AAGAGAAGCT
TTAGATAAAA TAGATCCATC TATTCTTCTG TACGGGGAAG GATGGACAGG AGGGTCTACT
CCTCTACCAG ATTCAAAGCA GGCAATTAAG AATAATGCAG TAGAACTCAA TGAAAGAATT
GCATGCTTTA GCGATGATAT ACGAGACGCC ATAAAGGGTA GTGTATTTGA TGCTTCTGAT
ACAGGATTTA TTAACAGTGG AAAACGCAAT GTCTCCAATA GGGATGAATC CATAAAATTC
GGTATCGTAG CATCTGTTTC TCATCCACAA GTGAATTTAA GCGGTGTGCC ATATTCCAGC
CGTTTTTGGG CAAATGAGCC GTCACAGACC ATTAATTATG CATCTGCACA TGACAACCTG
ACTTTATGGG ATAAGCTGTT AGAAACGAAT AAAATGGCGT CTAAAGAAGA GTTGGTACAG
ATGAACAAAT TGTCTGCGGC AATTGTACTA ACTTCCCAAG GAATTCCGTT TTTCCAAGCA
GGGGAAGAAA TGGCTAGGAC AAAGAAGGGA AATGATAATT CCTATCAGTC GCCAGACAGC
ATTAATATGT TGAATTGGGA CAATAAGACA GAATACAAGG ATTTATTTGA ATATTACAAA
GGATTAATCG CTCTTAGAAA AACTTACGAT GCATTCCGTA TGCAGACAGC AGAAGAAATA
CAACAAAAGT TAGAATTTGT CGATTCTGAC TCTTCCGTGA TTGCTTACCG AATTCATGAT
GCGGTAAAAG ATGGTAGAGA AATCGCATTA ATATTCAATG GAACATTAGA AGAAAAGGAA
GTAGTACTTT CTGCAAATGC ATGGGATGTA TTAGTAAACC AAGATACTGC TGGAACCGAT
GTCATAGAAA CCATAACAGG TGGAACAATT AAAGTGCCCG CAAAATCTAC ACTAGTTCTT
CTAGAGAATA AAGATGCAGT AATAAAAGGC GATAAAGATG CAGTAAAGGG AGACGAAATC
CAAGAGCTAC CTACGAATAT GCAGGAAGTA GCAGAAAAAG AGAGCGGGAA TGCATGGTTA
TGGGTCGGCA TAGCTACAGT CTGTGTTCTT GCAGGAGGAG TCCTATTCTG GATTTTAAAA
AGAAAACGCT AG
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| Protein sequence | MRRIIVGMLV VALLLSMIGV QTKNAKGATD TITIHYHRDD GDYEKWNLWL WAEGKDGAAY
YFDGEDAFGP YVSVSLDKSA DRIGFIVRTD SWEKDVSEDR FIDTSLGDEI WISSGESTFS
YEAPEGYEKE VSIESFQLKL NYLRYDEEYT DISFRLTFED GTTDFLTKEH MRIENGILKA
EKEVKYGKKI TLDVLKNGLE EDYQGVSFST AKIDEESKLE MYWMQGTGTI SPKADFIKRS
KEIESALITS MKEITVKLSV PCRVDDIKQD GFKLSPKLAV SKVEATSTRD SEYKTIKEGY
ADTFIITMEE PLDMSKKYAL SKTDYGSRNL TLDSGLYTSE EFEAAYTYEG NDLGATYSKE
KTVFKVWSPS AESISVLFYP HGEAKDGEKP EITYPMKQTG AGVWQAEIEG DLKNKYYVYQ
VTVDGKTKLV VDPYAKAAGV NGERGMVIDL SETDPDGFRE HSSPEFKNPV DAVIYEIHVR
DLSMNENSGI ENKGKFLGFT ETGTTNSAGL STGLDHMKEL GVTHVHLLPS FDYKTIDESK
LGENKFNWGY DPQNYNLPEG SYTTDPYQGE VRVREYKEMV QALHENGLHV VMDVVYNHTY
TAGDSNFTSL VPGYYYRTDI NGNFTNGSGC GNETASERAM VRKFIVDSVV YWATEYKVDG
FRFDLMGLHD IETMNMVREA LDKIDPSILL YGEGWTGGST PLPDSKQAIK NNAVELNERI
ACFSDDIRDA IKGSVFDASD TGFINSGKRN VSNRDESIKF GIVASVSHPQ VNLSGVPYSS
RFWANEPSQT INYASAHDNL TLWDKLLETN KMASKEELVQ MNKLSAAIVL TSQGIPFFQA
GEEMARTKKG NDNSYQSPDS INMLNWDNKT EYKDLFEYYK GLIALRKTYD AFRMQTAEEI
QQKLEFVDSD SSVIAYRIHD AVKDGREIAL IFNGTLEEKE VVLSANAWDV LVNQDTAGTD
VIETITGGTI KVPAKSTLVL LENKDAVIKG DKDAVKGDEI QELPTNMQEV AEKESGNAWL
WVGIATVCVL AGGVLFWILK RKR
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