| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2299 |
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| Symbol | |
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| ID | 5745358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2831394 |
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| End bp | 2832794 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641293389 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001559399 |
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| Protein GI | 160880431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.198843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA TTAATCAAAC GAGTAATACC AACAAAACTT CTATTAATAA TGTAACAGGT
AAAAAGGTAG CTTTTTTAAC GCTTGGTTGT AAGGTGAATT CCTATGAAAC AGAAGCTATG
CAGCAACTTT TTTTAGATGC TGGTGCTACG ATTGTGGATT TTGAAGAACT ATCTGATATT
TATGTTGTAA ATACCTGTAC AGTTACCAAT ATTGCGGATC GAAAATCTCG TCAAATGCTT
CATAAAGCAA AAAAGAATAA TCCAAATTCC GTAGTAATCG CGGTTGGTTG TTATGTTCAG
GCAGCAAAAG AAGCTTTACT TGAGGATGAT ACCGTTGACT TAGTGATTGG AAATAATAAA
AAGAACGAAA TTGTTTCCTT GGTTGATGAA TATTATGATA ACCAAAGCAA CTATGCTGTT
ATAGATATTG ATAATGATTT TGAATACGAG GAATTAGCAA TAGCGGCCGT AACAGAAAAA
ACAAGAGCAT ATATTAAAAT TCAAGATGGT TGTAATCAGT TCTGCAGTTA CTGTATTATT
CCTTATGCTC GTGGCAGAAT TAGAAGTAGA AGTGAAGAGG AAATCAAAAA AGAAGTGATG
CGACTTGTAG AAAATGGATA TCAAGAAATA GTCTTAACTG GAATCCATTT ATCTTCTTAT
GGTCTTGAGA CCCTATCAGT AAAAGAGCAA GCAGCTTTAC TTCCTGAGAA TGGTATTTCA
CCTTTAATGA CACTTATTTT AAGTTTAAGT GAAATAGAAG GTCTTAATAG AATTCGTTTA
AGTTCTTTAG AACCAAGAAT AATCACTGAA GAATTTGTTA AAACTCTAGC TAGATCAAAA
TTATGCCCTC ACTTTCATTT ATCCCTTCAA AGTGGTTGTA AAGAAACACT AGTTAGAATG
AATCGTAAGT ATACTCCGGA TGATTATTAT AAGCGATGTG AGATTATTCG AACATATTAT
GAAAATCCTG CAATTACTAC GGATGTAATC GTTGGATTCC CTGGGGAAAC AGAGGAAGAG
TTTGAAGATA CCAAGGCGTT CCTTGAAAAA GTTCAATTTT CTCAAATGCA TATTTTTAAG
TATTCAAAGA GAAAAGGAAC CAAGGCAGAA GCAATGCCAA ATCAAGTGCC AGAACAAATA
AAATCAAAGC GTAGTGAAAA TTTATTTGAT TCAGAGAAAA AGATGAGAGC AAAGTATTTG
GATTCTTTTA TCGGAATCAA TGAAATTGTC TTGACTGAAG AAGAGACAAT GATAGAGGAT
ACTTTGTATA TGATTGGTCA TACTACTCGT TATGTAAAAG TTGCTATTCC TGTATCAAAC
TTAAAAAGTA ATGAGTTAGT AAACGTACGT ATTACGGGAT ATTTGAATGA AGATGTCATG
CTTTCAGAAA TAATAGATTG A
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| Protein sequence | MQEINQTSNT NKTSINNVTG KKVAFLTLGC KVNSYETEAM QQLFLDAGAT IVDFEELSDI
YVVNTCTVTN IADRKSRQML HKAKKNNPNS VVIAVGCYVQ AAKEALLEDD TVDLVIGNNK
KNEIVSLVDE YYDNQSNYAV IDIDNDFEYE ELAIAAVTEK TRAYIKIQDG CNQFCSYCII
PYARGRIRSR SEEEIKKEVM RLVENGYQEI VLTGIHLSSY GLETLSVKEQ AALLPENGIS
PLMTLILSLS EIEGLNRIRL SSLEPRIITE EFVKTLARSK LCPHFHLSLQ SGCKETLVRM
NRKYTPDDYY KRCEIIRTYY ENPAITTDVI VGFPGETEEE FEDTKAFLEK VQFSQMHIFK
YSKRKGTKAE AMPNQVPEQI KSKRSENLFD SEKKMRAKYL DSFIGINEIV LTEEETMIED
TLYMIGHTTR YVKVAIPVSN LKSNELVNVR ITGYLNEDVM LSEIID
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