Gene Cphy_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2297 
Symbol 
ID5745356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2830432 
End bp2830884 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content37% 
IMG OID641293387 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001559397 
Protein GI160880429 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.470334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TGGGTTTGGA TTATGGCTCT GTGACGGTAG GCGTGGCTAT CAGTGATAGT 
TTAAAACTTA CAGCGCAGGG TATTGAAGTG ATACGAAGAA AGTCAGAGAC TAAGCTTCGT
CAGACTCTAG CACGTATTGA AGAATTGATA AAAGAATATG AAGTAGAAGA AATTGTACTT
GGATATCCGA AAAATATGAA CAATACCATA GGTGAACGTG CTGAAAAATC AGAGGAATTT
GCAGAACATC TTCGACGTAG GACAGGACTT CCTGTAGTAT TATGGGACGA GCGTTTAACG
ACTGTTGCAG CTCATCAGGT GCTAAATGCT GGTGAAGTCA GTCTTAAAAA GAAGATGGAG
GTAGTAGATA AACTTGCAGC AGTATTTATA TTACAAGGTT ATTTAGACTA CTTATCAAAT
AAAAAGAAAT TAAATTTAAC AGATTCACTA TAA
 
Protein sequence
MRIMGLDYGS VTVGVAISDS LKLTAQGIEV IRRKSETKLR QTLARIEELI KEYEVEEIVL 
GYPKNMNNTI GERAEKSEEF AEHLRRRTGL PVVLWDERLT TVAAHQVLNA GEVSLKKKME
VVDKLAAVFI LQGYLDYLSN KKKLNLTDSL