Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2297 |
Symbol | |
ID | 5745356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2830432 |
End bp | 2830884 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293387 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_001559397 |
Protein GI | 160880429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.470334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAA TGGGTTTGGA TTATGGCTCT GTGACGGTAG GCGTGGCTAT CAGTGATAGT TTAAAACTTA CAGCGCAGGG TATTGAAGTG ATACGAAGAA AGTCAGAGAC TAAGCTTCGT CAGACTCTAG CACGTATTGA AGAATTGATA AAAGAATATG AAGTAGAAGA AATTGTACTT GGATATCCGA AAAATATGAA CAATACCATA GGTGAACGTG CTGAAAAATC AGAGGAATTT GCAGAACATC TTCGACGTAG GACAGGACTT CCTGTAGTAT TATGGGACGA GCGTTTAACG ACTGTTGCAG CTCATCAGGT GCTAAATGCT GGTGAAGTCA GTCTTAAAAA GAAGATGGAG GTAGTAGATA AACTTGCAGC AGTATTTATA TTACAAGGTT ATTTAGACTA CTTATCAAAT AAAAAGAAAT TAAATTTAAC AGATTCACTA TAA
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Protein sequence | MRIMGLDYGS VTVGVAISDS LKLTAQGIEV IRRKSETKLR QTLARIEELI KEYEVEEIVL GYPKNMNNTI GERAEKSEEF AEHLRRRTGL PVVLWDERLT TVAAHQVLNA GEVSLKKKME VVDKLAAVFI LQGYLDYLSN KKKLNLTDSL
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