| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2290 |
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| Symbol | |
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| ID | 5745349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2823526 |
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| End bp | 2824149 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293380 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_001559390 |
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| Protein GI | 160880422 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.345877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGTCGT TTCCGAAACC GCTAAGCGCA AAGGAAGAAA ACGAGATGTT ACTTCAATGT
AAAGCAGGAA ATAAGGTTGC GAGAGATACT TTAATTGAAC GTAACCTTCG TTTAGTTGCG
CACATTGTTA AGAAGTATAA CACGCCGGAT CGAGAAACCG ACGACTTAAT TTCCATAGGC
ACGATTGGGC TAATTAAGTC CATCGATACC TTTGATTCCA CGAAAGGTAT TCGACTTGCC
ACCTATGCCT CTCGTTGTAT AGACAACGAA CTATTAATGA TGCTTCGTAG TGGTAAAAAA
CAGGCACGGG AAGTATATCT TTATGAACCT ATCGGCTCTG ACAAAGAGGG AAATGAAATA
AATCTTTTAG ATGTCATTGA AAGCACAGAT GAAGATATTG TTGATATCTT TGAAATTCAA
GAAAATATCA AACGACTCTA TACGTTTCTA AACACTGCCT TAAACGAAAG AGAACAAGAA
ATCATTATTA TGAGATATGG GCTAAGTGGA GAGAAAGAAA TCACGCAAAG AGAAATTGCA
GATAAATTGG GAATCAGTCG CAGTTATGTG AGTCGTATTG AAAAGAAGGC ACTAAAAAAA
TTAAAGGACT TATTTGAAAG TTAA
|
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| Protein sequence | MKSFPKPLSA KEENEMLLQC KAGNKVARDT LIERNLRLVA HIVKKYNTPD RETDDLISIG
TIGLIKSIDT FDSTKGIRLA TYASRCIDNE LLMMLRSGKK QAREVYLYEP IGSDKEGNEI
NLLDVIESTD EDIVDIFEIQ ENIKRLYTFL NTALNEREQE IIIMRYGLSG EKEITQREIA
DKLGISRSYV SRIEKKALKK LKDLFES
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