| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2228 |
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| Symbol | |
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| ID | 5744539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2748356 |
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| End bp | 2749678 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641293322 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001559332 |
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| Protein GI | 160880364 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000116408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGT ATATTTTAAT ATCGAATGAA TTGGAAGAAC TTATAAATTC ATCTGTTTTA
AACGAGGGCG ATAAATTGCA ATCTGTTCGA GCATTATCGC AAGATTATAA ATGCAGCAAG
AGTACTATTA TAAAAGCCCT TGAAGACTTA ACAAAGAAGC ATCTAATCTA TTCCGTTCCT
AAAAGCGGGT ATTATGTTGT GAAAAAGACA TTCGGTGAGG TTCAAGGCAG TAAATTGCTT
GATTTCACTA ACACCGCTCC AAACTGGAGT CACTTTCCGT ATTCCGATTT TCAGCACTGT
CTTAATAAGG CCTTTGACAC TTATCAACAA GACTTGTTTC AATACGGCAC CCTCCGTGGC
CTCCCATCGT TAATTGATGA AGCAAAGCGG CTTCTTGAAT CCTATAAAGT TTTTTGCAAT
AGTGAAAACA TTGTTATTTG CTCAGGTGTG CAACAAGCAT TAAATATTTT GTGTCAAATA
CCATTTCCAA ACAATAAAAG GAATATTTTA ATCGAAGAAC CGGGTTATCA TTTGTTCATA
CAAACATTAA AAATTTTGAA TATACCTGTT TCCACAATAA AAAGAGAACC TCATGGGATT
GATATTAATA AACTAGAAGA AATTTTCCGT ACCGGAGATA TAAAGTTTTT CTACCTTATG
CCTCGCATTC ATAATCCTTT AGGAGTGTCT TACACCAAAG AACAAAAAAA TCGGATTATC
TTTCTAGCAA ACAAATATGA TGTTTATTTG GTTGAAGATG ACTATTTAGC CGACTTTGAA
ACGGATTTAA AAGCCGAACC ATTATACTTT TATGATATAA ATCAGAGAGT TATTTATCTG
AAAAGTTTTT CAAAAATAAT GTTTCCGGGT TTACGAGTTG GCTTTGCGGT ACTCCCGGAA
GCTATTTGTG AACTATTTGC AGAATACAAA CGCTTGATAG ATATTGATAG CTCCATGTTT
TCACAGGGAG CATTAGACAT TTATATCAAA AGCGGTATGT TCAGCAGACA TATTCATCAA
GTCAGAAAAG TTTATGATGA AAAAACAAAA AAGCTAGTAG CTTCATTTAA ACTCCATAAA
ATTGATTGGT TGCTACCCCA AACGAAGATT AAAGGAGCAA AGACATTTTT GGAATTACCC
ACCTCTATGA ATAAATCTAT TTTAATAAAT TCTCTGCGCA AGCAAGGTAT AATCATTGAG
GGTCTGGAAA AGCACTACTA CACAAATAAT CAAAATGATA AAAGATTAAA ACTTGATATT
GCTAATATAG ATATTGAAAA AATTGAGGGT GCTGTTGAGA TTATCAGTAA TGAAGTTATG
TAG
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| Protein sequence | MEKYILISNE LEELINSSVL NEGDKLQSVR ALSQDYKCSK STIIKALEDL TKKHLIYSVP
KSGYYVVKKT FGEVQGSKLL DFTNTAPNWS HFPYSDFQHC LNKAFDTYQQ DLFQYGTLRG
LPSLIDEAKR LLESYKVFCN SENIVICSGV QQALNILCQI PFPNNKRNIL IEEPGYHLFI
QTLKILNIPV STIKREPHGI DINKLEEIFR TGDIKFFYLM PRIHNPLGVS YTKEQKNRII
FLANKYDVYL VEDDYLADFE TDLKAEPLYF YDINQRVIYL KSFSKIMFPG LRVGFAVLPE
AICELFAEYK RLIDIDSSMF SQGALDIYIK SGMFSRHIHQ VRKVYDEKTK KLVASFKLHK
IDWLLPQTKI KGAKTFLELP TSMNKSILIN SLRKQGIIIE GLEKHYYTNN QNDKRLKLDI
ANIDIEKIEG AVEIISNEVM
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