| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2181 |
|---|
| Symbol | |
|---|
| ID | 5744492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2691895 |
|---|
| End bp | 2692935 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293276 |
|---|
| Product | threonine aldolase |
|---|
| Protein accession | YP_001559286 |
|---|
| Protein GI | 160880318 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0421215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGTT TTGAATCGGA TTACACTGAA GGAGCACATC CTCAAATATT AACTAAACTT
GTTTCAACAA ATATGGAGCA AACAATAGGG TATGGGGAAG ATCCATATTG CGAGCATGCG
CGTGAGTTAA TTAAAGAAGC ATGTGGTAAT AATGAGTTAG CAGTACATTT CTTAGTTGGA
GGAACGCAAA CAAATACCAC CGTTATTAGC GCAGTTCTAA GACCATATCA AGGTGTACTT
TCTGCTGTAA CCGGACATAT TAATTGCCAC GAAACCGGAG CAATTGAGGC AACAGGACAT
AAGGTATTAC CCCTTGCTAG TGAAGATGGA AAAATCACAG CACAGCAAGT AAGAGATTAT
TACGATGAAC ACTGGTCAGA CTCCAGCCAT GAGCATGTTG TACAGCCTGG TATGGTGTAC
ATTTCACATC CAACAGAAAA TGGAACTACG TATCAAAAAG AAGAATTAGT TGAACTTTAT
AACACTTGTA AAGAGTTAGA GTTACCGCTA TTTATCGACG GTGCTAGATT AGGATATGCA
TTAGCATCTG AAGGCAATGA TTTAAGTCTT GAGGATATCG CCGCAAATAG TGATGTATTT
TACATTGGTG GAACCAAAGT AGGTGCTTTA TTTGGAGAGG CTATTGTAAT ATCAAATGAA
TCTATTAAAA AAGATTTTAG ATACAATATC AAACTTCGTG GCGGTATGTT GGCAAAGGGA
CGTCTATTAG GCTTACAGTT TGAAACATTA TTTACAGACA ATTTGTATCA AGAAATCTCA
GAACACGCTG TGACACAAGC GATGAGAATT AGAGATGCAT TTGCTAAGAA AGGATACCAG
TTCCTTTATG ATTCAAGAAC GAATCAGCAA TTTCCGATTT TACCAGTTAG TTTATTAGAC
TTCTTAGGAG AGAAGTATTC CTATAGTTTC TGGACAAAAG TTGATGACAC TCATAATGCA
GTACGTTTCT GCACTAGCTG GGCGACGAAA GAGGAAAATG TAGATGCTTT ACTTGCAGAT
ATTGAGGAGT TTCATAAATA G
|
|---|
| Protein sequence | MIRFESDYTE GAHPQILTKL VSTNMEQTIG YGEDPYCEHA RELIKEACGN NELAVHFLVG
GTQTNTTVIS AVLRPYQGVL SAVTGHINCH ETGAIEATGH KVLPLASEDG KITAQQVRDY
YDEHWSDSSH EHVVQPGMVY ISHPTENGTT YQKEELVELY NTCKELELPL FIDGARLGYA
LASEGNDLSL EDIAANSDVF YIGGTKVGAL FGEAIVISNE SIKKDFRYNI KLRGGMLAKG
RLLGLQFETL FTDNLYQEIS EHAVTQAMRI RDAFAKKGYQ FLYDSRTNQQ FPILPVSLLD
FLGEKYSYSF WTKVDDTHNA VRFCTSWATK EENVDALLAD IEEFHK
|
|---|
| |