Gene Cphy_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2148 
Symbol 
ID5744154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2657890 
End bp2659413 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content44% 
IMG OID641293243 
ProductDNA-repair protein 
Protein accessionYP_001559253 
Protein GI160880285 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000293029 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA GAACCTATAT TTCAATCGAC TTAAAATCTT TCTACGCTTC GGTCGAGTGT 
ATAGAACGAG GGCTGGATCC ACTAACCACT AACCTAGTTG TCGCTGACGC AAGCCGCACC
GAAAAAACCA TTTGTCTCGC CGTCTCTCCC TCTCTCAAAG CATACGGAAT TTCCGGCAGG
GCGAGGTTGT TTGAAGTCGT ACAGAAGGTC GAGGAAGTAA ATGCGGTACG GCTACACAAA
GCTCCAGGAC GAGCCTTTTC TGGCGATTCC TTCATAGATA CTGATTTGAA ATCCTCGCCA
AGTATCTCAC TGAACTATAT TGTTGCTCCA CCAAGAATGG CATATTATAT AGAGTACAGC
ACGCGGATTT ACAATATATA CTTGAAGTAC ATTGCGTCCG AAGATATCCA TGTCTATTCT
ATCGATGAAG TATTCATTGA TGCCACCGAT TATCTAAACA CCTACAATCT TTCAGCCCGT
GAGCTTGCCA CGAAAATGAT TCTGGATGTA CTCAAAACAA CCGGTATTAC AGCAACTGCG
GGAATTGGCA CAAACCTATA CCTTAGCAAG ATTGCAATGG ATATTCAGGC AAAGCACATT
CCTGATGATA ATAATGGTAT GCGGATAGCC GAGCTAGACG AAATGAGCTA CCGTCGCGCC
CTGTGGTCAC ATCAGCCTTT AACAGACTTT TGGCGCGTTG GAAAAGGATA TACCAAGAAA
CTGGAGGAAC AAGGCCTCTT TACGATGGGA GATATTGCAA GATGCTCTCT TGGTAAACCT
ACCGATTACT ACAACGAGGA TTTATTATAT AAGCTGTTCG GCATCAACGC TGAACTGCTG
ATTGACCATG CATGGGGGTG GGAGCCATGC ACAATTGCCG ATATTAAAGC GTATAAGCCG
AGCACAAACA GTATAGGATC TGGGCAGGTG CTGCAATGCG CCTATACTTT TGACAAAACG
AAGCTGATCG TGAGGGAAAT GACCGATTTA CTGGTACTTG ATTTGGTTGA TAAAAGGCTT
GTGACCGACC AGCTTGTTTT GACGGTCGGA TACGATATTG AAAATATGAC AAACCTGAAG
ATAAAGAAAT CATATCACGG AGCGATTACC ACTGACCACT ACGGACGTAC CGTTCCGAAA
TCTGCGCATG GTTCGGCAAA CCTTGGCAGG CAAACCTCCT CTACGAAGCT AATTCTGGAT
GCCGTTACAG AGCTGTTTGA ACGCATCGTA GACAAAAATC TACTGGTCAG AAGAGTCAAC
ATTACAGCGA ATCATGTTAT TGATGAGACA ACCGTTCAAA AGACGGACAG CTTTGAGCAG
CTTAATCTTT TTACAGATTA CGTGACTGAA AATGTGAAAA AAGAGGATGA AGAAGCCGAG
CTTGTACGAG AAAAAAGAGT GCAGAAAGCT ATGTTGGATA TAAAAAAGAA ATACGGCAAG
AACGCCATTC TAAAGGGTAT GAATCTGGAG GAAGGCGCTA CCACAGTTGA CCGAAATAAG
CAGATTGGAG GGCACAAGGC ATGA
 
Protein sequence
MKNRTYISID LKSFYASVEC IERGLDPLTT NLVVADASRT EKTICLAVSP SLKAYGISGR 
ARLFEVVQKV EEVNAVRLHK APGRAFSGDS FIDTDLKSSP SISLNYIVAP PRMAYYIEYS
TRIYNIYLKY IASEDIHVYS IDEVFIDATD YLNTYNLSAR ELATKMILDV LKTTGITATA
GIGTNLYLSK IAMDIQAKHI PDDNNGMRIA ELDEMSYRRA LWSHQPLTDF WRVGKGYTKK
LEEQGLFTMG DIARCSLGKP TDYYNEDLLY KLFGINAELL IDHAWGWEPC TIADIKAYKP
STNSIGSGQV LQCAYTFDKT KLIVREMTDL LVLDLVDKRL VTDQLVLTVG YDIENMTNLK
IKKSYHGAIT TDHYGRTVPK SAHGSANLGR QTSSTKLILD AVTELFERIV DKNLLVRRVN
ITANHVIDET TVQKTDSFEQ LNLFTDYVTE NVKKEDEEAE LVREKRVQKA MLDIKKKYGK
NAILKGMNLE EGATTVDRNK QIGGHKA