Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2141 |
Symbol | |
ID | 5744147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2649690 |
End bp | 2650472 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293236 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001559246 |
Protein GI | 160880278 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGG TGCTAATAGC AGAAGATGAG GATATTATTA GAAAAGGGTT AGCTTATACC ATTGACTGGT TAAGCATAGG ATATGTTTTG GTGGGGGAGG CTGCAAACGG TGAAGAAGGA CTTGAAAAGA TCAGAGAATT AAAACCGGAT GTGGTGATCA CAGACATTAT GATGCCAAAA TTAAATGGCC TTGAATTAAT ACGTCAGGCA AGTAAGGAGG TTCGATTTAA AAGTGTAATT CTTACAAGCT ATGCGGAATT TGATTATGCA AAAGAGGCGA TTGAGTTAAA AGCATATGAT TATCTTATGA AACCGGTTGA TGTAGATAAA CTAAAAGAGG TTATGCGTAA GCTACAAGAT GATATTAAAC TTGAAAATGA AAAGGAACTA TTATTCCAGC AAAAAAGTCA AGGAATGGAT ATTAAGCTTC TTTCTTCCAG TGACTCTTAT AAGAATCCCT ATGTTAAGAA AGCTATAGAT ATTATGAAAG AGCGTTATAT AGAAAAGCTA AGTATAGAAA GTATTTCAGA GGAATTAAAG GTTAGCTCCA GTTATCTTAG TAGAAAGTTT AAAGAAGATA CGGGACATAC CTATCTGGAT TTTTTAAATA TGTACCGTGT ACAGCAAGCC ATAAGACTTC TTGATGAAGG TGTTTATCGT GTTTATCAGG TGTCAGATAT GACGGGATTT ACGGACTATA AGCATTTTTG CGCGGTGTTT AAGCGTTATA CTAAAACCTC ACCTACAGAA TTTATAAAAA ATAAGGGATA TACCGGCCAA TAG
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Protein sequence | MLKVLIAEDE DIIRKGLAYT IDWLSIGYVL VGEAANGEEG LEKIRELKPD VVITDIMMPK LNGLELIRQA SKEVRFKSVI LTSYAEFDYA KEAIELKAYD YLMKPVDVDK LKEVMRKLQD DIKLENEKEL LFQQKSQGMD IKLLSSSDSY KNPYVKKAID IMKERYIEKL SIESISEELK VSSSYLSRKF KEDTGHTYLD FLNMYRVQQA IRLLDEGVYR VYQVSDMTGF TDYKHFCAVF KRYTKTSPTE FIKNKGYTGQ
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