Gene Cphy_2126 details

Gene Information

• Locus tag: Cphy_2126
• ID: 5744132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 2628955
• End bp: 2629557
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641293221
• Product: pentapeptide repeat-containing protein
• Protein accession: YP_001559231
• Protein GI: 160880263
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGAGC ATGATATCTA TAAAGCAATT GCTGGTGAAG AAACAATTGC AGGGCTTGCA 
TACACAAACG AAGAAATTGT TGATACTAAA ATAAATCGGA TAGAATTTGA TGGGATTGTC 
TTCTCAAAAT GCCGATTTGT TAACTGCGAT TTTAGTGGTA GTTCGTTTTT GAATGTAGCA 
TTTTTAAATT GTGATTTGTC GAATTGCAGA TTTCAGAATT GCTATTTTAG GGACACCAAA 
TTAAATGAGT GTAAAGGAGA TGGGAGTAAT TTCAGCCAAA GTTCATTACA CAGGGTTATA 
TTTGAAAGTG GTTCGTTTCA TTATTCAAAT TTTACCAATA TTCTAAGTGA TAATTGCTGT 
ATGTCTAATG TGGATTTTTG TGATTCAGCA TTCCAAGAAA TGAAGATTAA AAAAATACTT 
TTCCACACAG TGAATTTATC AAGATGTGAT TTCTTCAGAA CAAAATTAAA AGGTATTGAT 
TTGTCTACCT GTAATTTAGA GGGGATAACA GTATCCGATA CTTTTAAAGA ATTACAAGGA 
GCCAAAATCA GTGCTATACA AGCTATGGAT ATTGTGCAGT TACTTGGTAT TAAAATTGTG 
TAA 

 

Protein sequence

MLEHDIYKAI AGEETIAGLA YTNEEIVDTK INRIEFDGIV FSKCRFVNCD FSGSSFLNVA 
FLNCDLSNCR FQNCYFRDTK LNECKGDGSN FSQSSLHRVI FESGSFHYSN FTNILSDNCC 
MSNVDFCDSA FQEMKIKKIL FHTVNLSRCD FFRTKLKGID LSTCNLEGIT VSDTFKELQG 
AKISAIQAMD IVQLLGIKIV