Gene Cphy_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2005 
Symbol 
ID5743033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2474846 
End bp2475289 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content34% 
IMG OID641293102 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_001559112 
Protein GI160880144 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.323319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTAAAAGA GTTCAGAGAA TTCGCTTTAA AAGGTAATGT TATGAACCTA 
GCAGTCGGTG TTATTATCGG TAGTGCGTTT CAAGGAATCG TAACGTCTTT AACTGATAAC 
ATACTTTCAC CAATCATTGG TTTATTTACT CGCCAAAACT TCGACTCATT ACAGCTTAAT 
ATCTTTGGGA TAACACTAAG ATACGGTGCC TTTATAACTG CATTAATTAA CTTTGTCATC 
ATGGCTTTTG TAGTCTTCCT TTTAGTAAAA GGGATGAACA GAATACTATC CTTTGATGAT 
AAGAGAAAAA AGGTTGAAGT AAAACCTACA GAGAAGGATT GCCCATATTG CATGACAAAG 
ATAAATATTA ATGCTTCTCG CTGCCCTCAC TGTACATCAC AGCTTGAAAC AATTGCTATA 
AATGAAGAGG ATATTGCAAG ATAA
 
Protein sequence
MKKFLKEFRE FALKGNVMNL AVGVIIGSAF QGIVTSLTDN ILSPIIGLFT RQNFDSLQLN 
IFGITLRYGA FITALINFVI MAFVVFLLVK GMNRILSFDD KRKKVEVKPT EKDCPYCMTK 
ININASRCPH CTSQLETIAI NEEDIAR