Gene Cphy_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1998 
Symbol 
ID5744678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2465263 
End bp2466264 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content35% 
IMG OID641293095 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001559105 
Protein GI160880137 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.120304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT ATCTAGTAGA GATAAAGAAT GAACAACTTT CCTTTTTTAC TCAAGCGGGT 
GAGGTTAAAG CATTAAATGA TGTATCATTT CATTTAAAAA AGGGAGAAGT TCTAGGAATT
GTAGGAGAAA GTGGTTCGGG TAAATCAGTA ACAGCATATA GTCTAATGGG CTTAACTGCA
TATCCAGGTA AACTGATTGG CGGAACAATA GAATTTAATG GGCATGAAAT ACATAATATA
TCAGAAAAAG AAATGCAAAA GATTCGTGGA AATGAAATTT CCATTATATT TCAAGATCCA
ATGACAAGCT TGAATCCGGT TTATACAATT GGAAATCAAA TCATTGAGGT TATTCGCAGG
CATACGAATA AGAAAAAACA AGAAGCAAGA GAGTATGCCA AGGAATTATT GAATCTAGTT
GGAATCAATG AACCTGAGAA AAGACTAAAA CAATATCCAC ATGAGCTCTC TGGAGGAATG
AGACAAAGAG TGATGATTGC CATCGCGCTT GCCTGTGAAC CAAAGTTATT AATTGCGGAT
GAGCCAACTA CAGCTTTGGA TGTTACAATT CAGGCACAGA TTTTAGATCT GATGATGGAG
TTAAAAGAAA AACTTGGTAT GGCAATTATA TTAATCACTC ATGATCTCGG TATTGTTGCT
AGTATGTGTG AGAAGATTGC TGTTATGTAT GCAGGGAAAA TTGTTGAATA TGGTACGGTA
GAAGATATCT TTTATAATAC AAAACATGAA TATACAAAAG GATTATTAAG AAGTCTTCCT
CGTATTGATA TGAGTGAACA TGCAAAATTA ATTCCAATCG ATGGAACTCC GATTGATTTA
TTGAATCTTC CTAATGGTTG TTCTTTTGCT TCACGTTGCG GGAATTGCAT GAAAATCTGT
TTACAGCAAG TACCACCAGT AACGACGGTA AGTGAAACAC ATTTTGCTAC CTGCTTTATG
AACCAAAAGA AAGAGATGGA AGGAGGCAGC AAGGATGAAT GA
 
Protein sequence
MSEYLVEIKN EQLSFFTQAG EVKALNDVSF HLKKGEVLGI VGESGSGKSV TAYSLMGLTA 
YPGKLIGGTI EFNGHEIHNI SEKEMQKIRG NEISIIFQDP MTSLNPVYTI GNQIIEVIRR
HTNKKKQEAR EYAKELLNLV GINEPEKRLK QYPHELSGGM RQRVMIAIAL ACEPKLLIAD
EPTTALDVTI QAQILDLMME LKEKLGMAII LITHDLGIVA SMCEKIAVMY AGKIVEYGTV
EDIFYNTKHE YTKGLLRSLP RIDMSEHAKL IPIDGTPIDL LNLPNGCSFA SRCGNCMKIC
LQQVPPVTTV SETHFATCFM NQKKEMEGGS KDE