Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1998 |
Symbol | |
ID | 5744678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2465263 |
End bp | 2466264 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293095 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001559105 |
Protein GI | 160880137 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.120304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAT ATCTAGTAGA GATAAAGAAT GAACAACTTT CCTTTTTTAC TCAAGCGGGT GAGGTTAAAG CATTAAATGA TGTATCATTT CATTTAAAAA AGGGAGAAGT TCTAGGAATT GTAGGAGAAA GTGGTTCGGG TAAATCAGTA ACAGCATATA GTCTAATGGG CTTAACTGCA TATCCAGGTA AACTGATTGG CGGAACAATA GAATTTAATG GGCATGAAAT ACATAATATA TCAGAAAAAG AAATGCAAAA GATTCGTGGA AATGAAATTT CCATTATATT TCAAGATCCA ATGACAAGCT TGAATCCGGT TTATACAATT GGAAATCAAA TCATTGAGGT TATTCGCAGG CATACGAATA AGAAAAAACA AGAAGCAAGA GAGTATGCCA AGGAATTATT GAATCTAGTT GGAATCAATG AACCTGAGAA AAGACTAAAA CAATATCCAC ATGAGCTCTC TGGAGGAATG AGACAAAGAG TGATGATTGC CATCGCGCTT GCCTGTGAAC CAAAGTTATT AATTGCGGAT GAGCCAACTA CAGCTTTGGA TGTTACAATT CAGGCACAGA TTTTAGATCT GATGATGGAG TTAAAAGAAA AACTTGGTAT GGCAATTATA TTAATCACTC ATGATCTCGG TATTGTTGCT AGTATGTGTG AGAAGATTGC TGTTATGTAT GCAGGGAAAA TTGTTGAATA TGGTACGGTA GAAGATATCT TTTATAATAC AAAACATGAA TATACAAAAG GATTATTAAG AAGTCTTCCT CGTATTGATA TGAGTGAACA TGCAAAATTA ATTCCAATCG ATGGAACTCC GATTGATTTA TTGAATCTTC CTAATGGTTG TTCTTTTGCT TCACGTTGCG GGAATTGCAT GAAAATCTGT TTACAGCAAG TACCACCAGT AACGACGGTA AGTGAAACAC ATTTTGCTAC CTGCTTTATG AACCAAAAGA AAGAGATGGA AGGAGGCAGC AAGGATGAAT GA
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Protein sequence | MSEYLVEIKN EQLSFFTQAG EVKALNDVSF HLKKGEVLGI VGESGSGKSV TAYSLMGLTA YPGKLIGGTI EFNGHEIHNI SEKEMQKIRG NEISIIFQDP MTSLNPVYTI GNQIIEVIRR HTNKKKQEAR EYAKELLNLV GINEPEKRLK QYPHELSGGM RQRVMIAIAL ACEPKLLIAD EPTTALDVTI QAQILDLMME LKEKLGMAII LITHDLGIVA SMCEKIAVMY AGKIVEYGTV EDIFYNTKHE YTKGLLRSLP RIDMSEHAKL IPIDGTPIDL LNLPNGCSFA SRCGNCMKIC LQQVPPVTTV SETHFATCFM NQKKEMEGGS KDE
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