Gene Cphy_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1996 
Symbol 
ID5744676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2463267 
End bp2464184 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content38% 
IMG OID641293093 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001559103 
Protein GI160880135 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00478237 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGT ATATACTGAA GCGTGTTATT TTGGCAGTAG TGACGATATG GGGTGTAGCA 
ACTATCACCT TTTTCTTAAT GAATATGGTT CCAGGTGGCC CGTTTGTGGC TGAAAAGTCC
ATCAGTGTTC AGGCACAAAA TGCATTGAAT GAAAAGTATG GACTCGATAA GCCACTGTTC
GAACAATACA TAACATACCT TAAAGATGCA TCGCATTTTG ACTTTGGGGG TAGTTTAAAG
CAAAGAGGAC GAACTGTTAC TTCTATTATT GTATCGAAGT TTCCAGTTTC AGCAAAAGTG
GGGGGATTAT CCATACTTGT TTCATTATTA ATAGGAATTC CGTTAGGATG TATTGCTGCT
GTGCGAAGAG GCAAGTTTTT GGATCATTTT ATTAGTATTT TTGCAACTTG TGGAATAGCG
GTACCGAGCT TTGTAATCTG TACTGTTCTT ATGTATTTGT TAGGGTCAAA GCTGGAATTA
TTACCGACTT TTGGTTTGAC TTCATGGAAA CATTATTTTA TGCCAGTAAT TTCTTTGTCT
TTCTATCCGA CTGCTTATAT TATGCGTCTT ATGCGTTCCT CGATGCTTGA TGTTCTTGGT
CAAGACTATA TTAGGACTGC AAGAGCGAAG GGATTACCAG TGTACGTCTG TTTGTTTAAG
CATGCACTTC GAAATGCAGT ATTGTCCGTT ATTACATATC TAGGTCCCAT GATGGCATTT
ACAATGACAG GAAGTTTTAT TGTAGAAAAG ATTTTTACAC TACCGGGACT TGGAGGAGCA
TTTGTTAGTT CTATTCTAAA CCGTGATTAC ACACTCATCA TGGGAACAAC GATATTTCTT
GCTTCTTTTT TGGTAATCAT GAACATGCTA GTGGACATCA TCTATCAATT TGTTGATCCG
CGTATCAAAT TAAGCTAA
 
Protein sequence
MLKYILKRVI LAVVTIWGVA TITFFLMNMV PGGPFVAEKS ISVQAQNALN EKYGLDKPLF 
EQYITYLKDA SHFDFGGSLK QRGRTVTSII VSKFPVSAKV GGLSILVSLL IGIPLGCIAA
VRRGKFLDHF ISIFATCGIA VPSFVICTVL MYLLGSKLEL LPTFGLTSWK HYFMPVISLS
FYPTAYIMRL MRSSMLDVLG QDYIRTARAK GLPVYVCLFK HALRNAVLSV ITYLGPMMAF
TMTGSFIVEK IFTLPGLGGA FVSSILNRDY TLIMGTTIFL ASFLVIMNML VDIIYQFVDP
RIKLS