Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1996 |
Symbol | |
ID | 5744676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2463267 |
End bp | 2464184 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641293093 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001559103 |
Protein GI | 160880135 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00478237 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGT ATATACTGAA GCGTGTTATT TTGGCAGTAG TGACGATATG GGGTGTAGCA ACTATCACCT TTTTCTTAAT GAATATGGTT CCAGGTGGCC CGTTTGTGGC TGAAAAGTCC ATCAGTGTTC AGGCACAAAA TGCATTGAAT GAAAAGTATG GACTCGATAA GCCACTGTTC GAACAATACA TAACATACCT TAAAGATGCA TCGCATTTTG ACTTTGGGGG TAGTTTAAAG CAAAGAGGAC GAACTGTTAC TTCTATTATT GTATCGAAGT TTCCAGTTTC AGCAAAAGTG GGGGGATTAT CCATACTTGT TTCATTATTA ATAGGAATTC CGTTAGGATG TATTGCTGCT GTGCGAAGAG GCAAGTTTTT GGATCATTTT ATTAGTATTT TTGCAACTTG TGGAATAGCG GTACCGAGCT TTGTAATCTG TACTGTTCTT ATGTATTTGT TAGGGTCAAA GCTGGAATTA TTACCGACTT TTGGTTTGAC TTCATGGAAA CATTATTTTA TGCCAGTAAT TTCTTTGTCT TTCTATCCGA CTGCTTATAT TATGCGTCTT ATGCGTTCCT CGATGCTTGA TGTTCTTGGT CAAGACTATA TTAGGACTGC AAGAGCGAAG GGATTACCAG TGTACGTCTG TTTGTTTAAG CATGCACTTC GAAATGCAGT ATTGTCCGTT ATTACATATC TAGGTCCCAT GATGGCATTT ACAATGACAG GAAGTTTTAT TGTAGAAAAG ATTTTTACAC TACCGGGACT TGGAGGAGCA TTTGTTAGTT CTATTCTAAA CCGTGATTAC ACACTCATCA TGGGAACAAC GATATTTCTT GCTTCTTTTT TGGTAATCAT GAACATGCTA GTGGACATCA TCTATCAATT TGTTGATCCG CGTATCAAAT TAAGCTAA
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Protein sequence | MLKYILKRVI LAVVTIWGVA TITFFLMNMV PGGPFVAEKS ISVQAQNALN EKYGLDKPLF EQYITYLKDA SHFDFGGSLK QRGRTVTSII VSKFPVSAKV GGLSILVSLL IGIPLGCIAA VRRGKFLDHF ISIFATCGIA VPSFVICTVL MYLLGSKLEL LPTFGLTSWK HYFMPVISLS FYPTAYIMRL MRSSMLDVLG QDYIRTARAK GLPVYVCLFK HALRNAVLSV ITYLGPMMAF TMTGSFIVEK IFTLPGLGGA FVSSILNRDY TLIMGTTIFL ASFLVIMNML VDIIYQFVDP RIKLS
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