Gene Cphy_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1929 
Symbol 
ID5744608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2382327 
End bp2384720 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content38% 
IMG OID641293025 
Productglycosyltransferase 36 
Protein accessionYP_001559036 
Protein GI160880068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3459] Cellobiose phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG GTTACTTCGA CGAAGCAAAC AGAGAATATG TAATTACAAA ACCGAATACC 
CCAGCTCCAT GGGCAAATTA TTTGGGTTCC CCCGAGTATG GTGCTATTAT ATCGAATAAC
GCAGGTGGCT ATAGCTTTGT GAAGAGTGGT GCAAATGGTA GAATATCAAG ATATATATTC
AATCAGGAAG ACAAACCAGG AAGATATATT TATTTACGTG ATGATGTATC AGGGGATTAT
TGGTCAGCAT CATGGCAGCC AGTTGGTAAA GATTTATCGG TTTATCAAAA TGAATGCCGT
CATGGTACCG CTTATACCAA AATTAGTGCT GATTATTCTA ATATTCATTC CGAAGCTTTA
TATTATGTTC CTTTAAACAA GACACATGAA GTTTGGAAGT TGTCTGTAAC CAATACCGAC
AATAAAGAAC GAAAAATTTC CACCTTCGGC TTCATTGAAT TTACGAATGA GGACTATTAT
GAAAATGATC AAGTTAATCT CCAGTATACA CTCTTTATTA CCAAAACTTA TTTTAAAGAG
AATAAGATCC TACAAACAAT TAACGAAAAT ACTGGCAAGA ATGCAGAAGG TACGAATTAC
CGTGAACGTT TCTTTGGTAG TGTAGGTCAA CCTATTGTTT CCTATAATGG TGACAAGGCA
TCCTTTATTG GGCGTTATCA TAGTTATGGA AATCCAGTTG CCGTTATCAA TGGATGCTGC
GATAATACTT TAAATTATAA TTCTAACGCA TGCGGTGCCC TTCACTCCAT ATTAACTCTT
GCACCTGGTG AAACAAAGGA ATTAGTATAC ATATTAGGTA AGAAAAATGA TAAAGACTCT
GCAGAAATTT TAAAAGGTTA TGAGGATTTT TCTATCATCG AGAATGAGTT AGTAGAGTTA
AAAACATATT GGCATGGAAA ATTAGAGCAA TTCCAGGTTC AAACCCCAGA TGATAACTTT
AATCATATGG TTAATACGTG GAATGCTTAC CAATGCTTTA TCACATTTAT CTGGTCAAGA
GCCGCTTCTT TCATGTATGC AGGATTAAGA AACGGTTACG GTTATCGAGA TACCGTACAA
GACATACAAG GTATCATTCA TCTTGATCCA GAATTGGCGG GTGAAAAGAT TCGCTTCATG
CTATCAGCGC AGGTAGATAA TGGTGGCGGT TTACCATTAG TAAAGTTCAA TCATAACGCT
GGTCATGAAG ATACTCCTGA CGATGCTTCT TATGCACAAG CAACTGGACA TCCAGCTTAC
CGTGCAGATG ACGCTCTCTG GTTATTCCCT ACGGTATTAA AGTACATTTC TGAAACAGGA
AATAAAACAT TTATTGATGA AGTTATTCCA TATGCTAATA AAGACGAAGG AACCGTTTAT
GATCACTTAA AGAGAGCTAT AAATTTCTCT ATGGAGCGCC TAGGGGCACA TAATATGCCT
GCTGGACTTC ATGCTGATTG GAACGATTGT TTGCGACTTG GTAAAAAAGG AGAATCTTCC
TTCGTAGCAC TACAGTTATA TTATGCTATG ACCGTAATTC GTGCGTTTGC AAAGGAAAAA
GATGATGACG TTTATCTTGC CTATTTAGAT AAAGTACAAA CAGAACTTGG TGAAACCATC
CAGAAATATT GTTGGGAAGA AGATCGTTTT ATCCGTGGCT TTAAAGAAGA TGGTCAAGTA
ATCGGTTCTA AGAAAGATCC AGAAGCAAAT ATGTGGCTAA ATCCACAGTC ATGGTCAGTG
ATTAGTGGTC TTGCTACTAA GGACCAAGCT GAAAAAGCAT TAGAGAGTGT TCATCGCGAA
TTAAATACAG CGTATGGATG CCGCTTAATG GCTCCATCCT ACGTTGACCA TGCATTTGAC
GGTGCTCTTG CTATCTTATT TAATAAATCA ACCAAAGAGA ATGGTGGTAT CTTCTCGCAG
CCACAAGGTT GGATCATCCT TGCAGAATCC TTAATGGGTC ATGGTGATTG CGCCTATCAG
TATTTTAAGG AGAGCTCTCC ATCTTCTCAG AATGATAATG CAGATGTCCG TGTTCTTGAA
CCATATGTTC ATGGGCAATT TACAGAATCG GTTGATAGCC CATTTGAAGG CCGATCCCAT
GTACACTGGT TGACAGGAAC TGCATCAACT GTGATGGTTG GCTGCGTCGA AGGTATCTTA
GGTATACGTC CTAACTTCGA TGGTCTATTA CTCTCCCCTT CCATACCATC CAATTGGAAA
GAAGTTAAAA TTACTAAGAT GTTCCGCAAT AAGAAGTTAA ATATTACGAT ACAAAACTTT
GATGGTGCAG AAGGTGGTTA CCGCGAATGT TACTTAAATG GAACAATACT TTCTTCAAAT
TACATTCCTG CGGAATCACT ATCTGTAGAA AATGAAGTAT TATTAGTAAT GTAG
 
Protein sequence
MNYGYFDEAN REYVITKPNT PAPWANYLGS PEYGAIISNN AGGYSFVKSG ANGRISRYIF 
NQEDKPGRYI YLRDDVSGDY WSASWQPVGK DLSVYQNECR HGTAYTKISA DYSNIHSEAL
YYVPLNKTHE VWKLSVTNTD NKERKISTFG FIEFTNEDYY ENDQVNLQYT LFITKTYFKE
NKILQTINEN TGKNAEGTNY RERFFGSVGQ PIVSYNGDKA SFIGRYHSYG NPVAVINGCC
DNTLNYNSNA CGALHSILTL APGETKELVY ILGKKNDKDS AEILKGYEDF SIIENELVEL
KTYWHGKLEQ FQVQTPDDNF NHMVNTWNAY QCFITFIWSR AASFMYAGLR NGYGYRDTVQ
DIQGIIHLDP ELAGEKIRFM LSAQVDNGGG LPLVKFNHNA GHEDTPDDAS YAQATGHPAY
RADDALWLFP TVLKYISETG NKTFIDEVIP YANKDEGTVY DHLKRAINFS MERLGAHNMP
AGLHADWNDC LRLGKKGESS FVALQLYYAM TVIRAFAKEK DDDVYLAYLD KVQTELGETI
QKYCWEEDRF IRGFKEDGQV IGSKKDPEAN MWLNPQSWSV ISGLATKDQA EKALESVHRE
LNTAYGCRLM APSYVDHAFD GALAILFNKS TKENGGIFSQ PQGWIILAES LMGHGDCAYQ
YFKESSPSSQ NDNADVRVLE PYVHGQFTES VDSPFEGRSH VHWLTGTAST VMVGCVEGIL
GIRPNFDGLL LSPSIPSNWK EVKITKMFRN KKLNITIQNF DGAEGGYREC YLNGTILSSN
YIPAESLSVE NEVLLVM