Gene Cphy_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1874 
Symbol 
ID5743163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2305913 
End bp2308174 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content36% 
IMG OID641292971 
ProductKojibiose phosphorylase 
Protein accessionYP_001558982 
Protein GI160880014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGA CATTAACAAA TTCAAGTCTT GATAAGGATA GTATCACATC AAATGGTAAC 
AGATTTTTAA TTGGAAATGG TTATCTGGGA ATCCGAGGAA CCCTAGAAGA ATATAGAAAA
GAATATTTTC CAGCTATTAA TTTAGCGGGA ATTTATGATC AGGTTGGTGA GGGGTGGAGA
GAACCTCTAA ATGCACCCAA TGCATTATAT ACGAGGATTG AAGTTGACGA GGTAGAATAT
CAATTACCGA AAATAGAACC AAGGTATCAT GAATTATCAC TTGATTATCG TCATGGGATT
TTAGATAGAC AAACAGTTTG GGCTTCTAAT AAAGGGACAA TAATTGTAAA ATCAAGCCGC
TTTGCAAGTA TGAAAGAGAA ACATTTGGTT GTCTTAAATT ATAGTATAAC AGCAGATTAT
GATTGTGAAA TTATAGTTTA TACAGGGATT GATGGAAGTG TCTGGGATAT TCATGGGCCA
CATTACGATA AAGTTGAGTT TCAAAAACAG CTGTTAAGGC ATAATGAAAC TGAGATTTTA
AATGAGAAGT ATTTATTAGA ATCTGAATCT AAATGGAATG GACATCGTCT ATCAATAGCA
GCACAAACTC ATGAAAATAA AGATATTGTC TATGTCACAG AGGATATCAT ATGTAACAAA
GAGGCTAAGA TAGAACTTAT AGAAAGTGAT AAAGAGTGTC TTAGAAAGCT TACTTTTCAT
GGAAAAGCAA AGGAGGAAAT AAACTTTACA AAGTATATCA CGGTCTTTAC AAGTAAAGAC
TGTGTTGATT ATAAGGAACA GTCAATAAAA ATTGTAAATC ATGCGAAAGA CACAGGTTAT
GAACGTTTAC AAGAAGAGCA TAAAAATGTA TGGGAGCAAT TATGGAATAT CTCGGAGGTT
ACAATTGAGG GAGACGATGA GGCTAATGAT GCTCTCAATT ACTCCCTATA TCATCTTCAT
TGTATTGCAC CAAGGCATAG TAAAAGCTTA TCAATAGCTG CAAGAGGGTT ATCTGGGCAG
ACATATAAAG GTGCTGTTTT TTGGGATACT GAAATGTTTA TGTTGGACTT TTTTCTGTAT
ACGCAACCAG AAGTGGCAAA GACCTTATTA CGCTACCGGA TTGATACGTT AGAGGGGGCT
AAGAAAAAGG CAAAGCTTTA TGGGTATGAA GGAGCTTTTT ATGCATGGGA AAGCCAGGAA
GGTGGCTATG ATGCTTGTTC CGATTATAAT GTTACCGATG TGTTTACCAA ACGACCAATG
AGAACGTACT TTAAAGATAA ACAAGTACAT ATATCTTCCG CTATTGTATA TGGCATTCGT
TCCTACTTAA ATTACACGAA TGATTTTTCC ATTCTCGCTG AAGGTGGAGC AGAGACAATC
CTAGAATGCG CGAAGTTTTA TTATAGTTTA TTGGAAAAAA AGATTGGGAA GGAATACTAC
GAAATTCATG ATGTGATTGG ACCAGATGAA TATCATGAGA GGGTAAACAA TAATGCATAT
ACAAACCGAA TGGCGAAGTT AACCTTCGAG ACTGCTATTG ACATATTAGA TCATGAAAAA
AATAAAGATG AAGAATTTTA TATTAAATTA TTAAAACAGT ACGAGATTAA GGATCTGTTA
GATAAATTAA AAGATGCATG CAATAAGTTA TATATACCGA AACCAAAAGA TAACTCTGAT
CTGATAGAAC AATTTGATGG CTTCTTCGAA TTAGAGGATG TTTCATTAGA AGAGGTTCGT
TCCAGGTTAT TGCATGAGAA GGAATACTGG GGAGGTGCCT ATGGTGTAGC CTCTCATACT
CAGGTAATCA AACAAGCAGA TGTAGTTACT ATGTTAGTTC TATTTAAAGA AGAATATCAA
AGGGAGGTAT TACAGCAGAA TTTAAATTAT TATGAACCAA GAACTGAGCA TGGCTCCTCC
TTAAGTGCTT GCATGTATTC CTTATTGTAT TGCATGTGTG ATCAACCTCA ATACGCATAC
CCATTCTTTA TGAAATCAGC GCTGGCTGAT TGGAATGGAA AAGGAAAAGA GTGGGCCGGA
CTAGTCTATA TTGGAGGAAC TCACCCAGCA GCAGCTGGAG GTGCATACAT GACAGCAATC
AAAGGCTTTG GTGGCTTTCA GATAGAAAAC GGTGTTATAA AAGCTACCCC TAGGTTACCA
AAACATTGGG TTAGACTTAA GTATAGAGTA TTGTATCAAG GAGCTATCTA TGAGATTGAT
GCATCTAAAG AACAGGTATC TATTAGTAAA ATTGAAATGT AA
 
Protein sequence
MNWTLTNSSL DKDSITSNGN RFLIGNGYLG IRGTLEEYRK EYFPAINLAG IYDQVGEGWR 
EPLNAPNALY TRIEVDEVEY QLPKIEPRYH ELSLDYRHGI LDRQTVWASN KGTIIVKSSR
FASMKEKHLV VLNYSITADY DCEIIVYTGI DGSVWDIHGP HYDKVEFQKQ LLRHNETEIL
NEKYLLESES KWNGHRLSIA AQTHENKDIV YVTEDIICNK EAKIELIESD KECLRKLTFH
GKAKEEINFT KYITVFTSKD CVDYKEQSIK IVNHAKDTGY ERLQEEHKNV WEQLWNISEV
TIEGDDEAND ALNYSLYHLH CIAPRHSKSL SIAARGLSGQ TYKGAVFWDT EMFMLDFFLY
TQPEVAKTLL RYRIDTLEGA KKKAKLYGYE GAFYAWESQE GGYDACSDYN VTDVFTKRPM
RTYFKDKQVH ISSAIVYGIR SYLNYTNDFS ILAEGGAETI LECAKFYYSL LEKKIGKEYY
EIHDVIGPDE YHERVNNNAY TNRMAKLTFE TAIDILDHEK NKDEEFYIKL LKQYEIKDLL
DKLKDACNKL YIPKPKDNSD LIEQFDGFFE LEDVSLEEVR SRLLHEKEYW GGAYGVASHT
QVIKQADVVT MLVLFKEEYQ REVLQQNLNY YEPRTEHGSS LSACMYSLLY CMCDQPQYAY
PFFMKSALAD WNGKGKEWAG LVYIGGTHPA AAGGAYMTAI KGFGGFQIEN GVIKATPRLP
KHWVRLKYRV LYQGAIYEID ASKEQVSISK IEM