Gene Cphy_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1824 
Symbol 
ID5743113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2255253 
End bp2255684 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content34% 
IMG OID641292921 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001558932 
Protein GI160879964 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAT CAACAAAAGG GCGATATGCT ATTCGAGTTT TGATAGATCT AGCAGAACAT 
AATAATGGAG AATTTATTAC ATTAATGGAT ATTGCCGGGC GGCAGGAAAT ATCCGAGAAG 
TACTTAGAAG CCATCGTTTC CATATTAAGC AAGAATGATT TACTTATTTC TTTGAGAGGA 
AAAGGTGGTG GTTATAAACT GGCAAAAGCA CCAGAACAGT ATACAGTCGG CAGTATCTTA 
AGATTGACAG AAGGTTCTCT TGCACCTGTA TCCTGTCTTG AAAAGACACC AAATAATTGT 
ACAAGGGCTA CTGAGTGCCG GACTTTACAT ATGTGGGAAG AATTTTATAA ATTAACCAAT 
GATTATTTTG ATGGAATTAC AATAGCAGAT TTAGTTAAGA AAAATGATAG TGCTGATTAT 
TATATGATAT AA
 
Protein sequence
MKISTKGRYA IRVLIDLAEH NNGEFITLMD IAGRQEISEK YLEAIVSILS KNDLLISLRG 
KGGGYKLAKA PEQYTVGSIL RLTEGSLAPV SCLEKTPNNC TRATECRTLH MWEEFYKLTN 
DYFDGITIAD LVKKNDSADY YMI