| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1802 |
|---|
| Symbol | |
|---|
| ID | 5743091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2221794 |
|---|
| End bp | 2223398 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641292899 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_001558910 |
|---|
| Protein GI | 160879942 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00239291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCT CAGCGTTCTA TGACAACAAG TGGCACGAAA AACCATCGGA GCTGTCATCA
AATTGGATTG TTCATAATAT CTGTCTTAAC ACAACCGCAG ACATTTCTAA GGATGGTACT
TTTATCGGGA ATCCTACAGA ATGTGCGATG TTAAACTTTT ATGAGCGTTC TGATATCAGA
AAAAATAGCG AGAAATCCTA TAAAGACGAA CGTTCAGATC ATGAAGTGCT ACATGCTTTT
CCATTTTCCT CCGAGCTAAA GCACATGACA ACCATCAGCA AGGTGGATGG TAAAATCATT
TCATATGTAA AGGGCAGCCC AGAATGTGTA TTTACGATGT GTGACATTTC TGATACCAGA
AAAACTGAGA TTGAACAATA CATTACAAAG GCCCAGAAAA AAGCCATGCG TGTAATAGCC
TTTGCACACA AAGAACTTGA TGATATGAGG GACTATAATG ATGAGCGTCA CCATACTGCA
ATGGAGACTG ATATGGTTTT TGATGGCTTT ATCACAATAT CCGATCCACT GCGTGCTGAT
GTATACGAAG CAGTTAAAAA TTGCCGTCTT GCTGGTATTG ATTTAAAAAT ACTGACAGGA
GATAATATCG TCACTGCTAC TGCTATTGCC AATGAACTTC ATATTTTAAG TGGAGAACAC
ATTGCTGTTG AAGCAAAAGA CATTATTGAT TTAAACGATG ATGAGTTATT AAATATGATT
CCTAAAATTA GTGTTATCGC TCGAAGTACT CCAACCATAA AAATGCGTGT TGTCAAACTG
CTTAAGGCAC AGGGAAATGT AGTTGCTGTC ACAGGGGACG GTATCAATGA CGCGCCTGCA
CTTAAAAATG CCGATGTGGG TATAGCCATG GGCATCTCTG GTACAGAAGT GTCCAAAGAA
GCTAGTGACA TCGTTCTTCT TGATGACTCC TTTTCAACTA TTGTTAAGGC AATTGCCTGG
GGACGTGGGA TTTACGAAAA CTTTAAGCGG TTTATTCAGT TCCCGCTGAC AGTAAATGTA
TCCTCTGTTA TCGTTGTCTT TATATCGATC ATTTTGGGAC TCAAAGAACC CTTTACAGCC
TTACAACTCT TATGGATCAA CATTATTATG GATGGCCCAC CTGCGCTTAC TTTAGGTCTG
GAGCCTATTT ATGACGATCT GATGAGCCGC CCTCCAACAA AGCGGAGTGA CAATATTATA
TCGAAAGCTA TGCTAACAAG AATTGGGCTA ATGGGAACAT ATATTTCTAT TATCTTTTTA
TGCCAGTATA ACTTCAACTT TTTAGGAGCG ACTACAGCGC AAATGTCCAC CGTACTTTTT
ACATTGTTTG CATTGTTCCA ACTATTTAAC GCCTTTAATT GCCGTGAACT TCACTCAGTC
AGTATCTTTA AGCATTTATT GAAAAATAAG ATTATGTTGT TGGTTATTTC TATTACCTTT
GTGCTGCAAG TCTTAATTAT ACAGTTTGCT GGTGCATTTT TCGGTACCAT CCCGCTTGAC
TTAATGATGT GGATGAAATT GTTTGGAGTT TCATTTAGCG TTATTTTGAT ATCTGAACTT
GGGAAGCTAA TATGGAGACT GCTTCATAAA TATAAACTAT CGTAG
|
|---|
| Protein sequence | MTVSAFYDNK WHEKPSELSS NWIVHNICLN TTADISKDGT FIGNPTECAM LNFYERSDIR
KNSEKSYKDE RSDHEVLHAF PFSSELKHMT TISKVDGKII SYVKGSPECV FTMCDISDTR
KTEIEQYITK AQKKAMRVIA FAHKELDDMR DYNDERHHTA METDMVFDGF ITISDPLRAD
VYEAVKNCRL AGIDLKILTG DNIVTATAIA NELHILSGEH IAVEAKDIID LNDDELLNMI
PKISVIARST PTIKMRVVKL LKAQGNVVAV TGDGINDAPA LKNADVGIAM GISGTEVSKE
ASDIVLLDDS FSTIVKAIAW GRGIYENFKR FIQFPLTVNV SSVIVVFISI ILGLKEPFTA
LQLLWINIIM DGPPALTLGL EPIYDDLMSR PPTKRSDNII SKAMLTRIGL MGTYISIIFL
CQYNFNFLGA TTAQMSTVLF TLFALFQLFN AFNCRELHSV SIFKHLLKNK IMLLVISITF
VLQVLIIQFA GAFFGTIPLD LMMWMKLFGV SFSVILISEL GKLIWRLLHK YKLS
|
|---|
| |