| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1742 |
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| Symbol | |
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| ID | 5741416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2142860 |
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| End bp | 2144422 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641292842 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001558853 |
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| Protein GI | 160879885 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTA CGAAGTTAAT AGAAAGAATT TCAGAAGAAT ATTCAATTGA TATCCTATCC
CAAGGGGAAG ATTTAGAAAT ACAGGATGTT GCTTTGATTG ATAATAAACA TGATAATGCG
ATTAGGACTA CTCTTTACTT TGGTTATGAC AAACAATTAA CAAACGCTGT GTCGGTTCCA
TATCAATGCA TAATTGCTCG CACGGATCTT GCAGCGCCTC CCCTTTCCAC TGTGGGTAAT
ATTGCTTTAG TATCGGAAGA CTCTTTATTT ACTATATTCA ACGATGCAAA AGCTTTGATT
GAAACGACTC GTAAAGGGAT TGGAATTTTT GAGGAACTTA CTGCTCTCGC AGATAAAACC
CATAACATTG AAGCCGTTAT TGATGCTGCC TCTGTAAGGC TTGGAAATTC TTTACTATTC
TGTGATATGA ACTTTAAAAT CATTGCCAGT TCTACTTCTG TCCCTGTCCT CGATCCTCTT
TGGAAAGAGA ATACGAAACA GGGATACTGC TGCTATGAAT TTATTAGTGA AGTAAAAGAA
TTGAAATCTA TACGTAACGC TTCTCAGACT ACAGCCGCTG TTGAAGTTAC CTGCATCAAA
TCCCCTTACC GTAAGTTAAG CAGTAAAGTT TTTCATAATC AAACTCAGAT TGGGTTCTTA
TTGATGATTG AAGGAGAGAA CAATTTTCTT CCTTACCATT TTGAAATGCT AAGCATAATA
AGCCATGTTA TTAGCTACAC CATAGCGTAC TATACACCTA ACCTTTTTGA AAAAAACAGC
CTTTATCATG AATTATTATA TGATATGCTG ATTGGTGCGC CTGAAAAGGA TATCATGCCA
AGACTGGCAG AACTACATTT TCCTGACAAA ATGCTGGTTC TATTCATTCG TCCTACAAAA
TATCTTGGAC TACAGTACTT AAAAAGCTCT GTATGCAAGA ATCTGAAAAT ACAGATTCCC
GGTACCCATG TTACTTATCA TAAAAACGGT ATTGTGGCGG TAATTCCGTT AAAGGAAGAT
ACTGAAATGA ATTTAATGTT ACTAGAACTA TTGAAATGCT TTTCAAAAAA GGAACACATA
CGAATTGGAA TCAGTAATTC TTTTGCTTGT ATTGAAAACT TTGTAAGCCA TTATGAACAA
GCCCATGCTG CATTAAAGTT GGGTCATAAA TTAAACCCGG AAGGTTTGGT ATACCACTAT
CAAAATTATC AGATTTTTGA TTTGTTTTCG GAAGCAAAGA ATCCCGATAA ATTAGGACGG
TTCTGCCATC CTGCTCTGGC AGTTCTCCGT CAGTATGACC ATGAAAACAG TTCCCAGCTG
TATAAGACCT TATGTGTCTT CATAAATAAG GGATGTAACA TTAAATTAAC TTCAGAAAGT
TTATTTATTC ACCGAAATTC ACTTGTCTAC CGTTTAAATC GTATCACTGA ATTAAGCCAG
GTTGACCTTT CAGACATTAA TACGCTTTTC CTGCTTCGAC TTTCTTTCCT CATTGACCAG
TATAATGAGC AAAATAAAAG CTCGGCTAAA TCCTTTCAGC CTAATAATGC ATTAACAATT
TAA
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| Protein sequence | MTFTKLIERI SEEYSIDILS QGEDLEIQDV ALIDNKHDNA IRTTLYFGYD KQLTNAVSVP
YQCIIARTDL AAPPLSTVGN IALVSEDSLF TIFNDAKALI ETTRKGIGIF EELTALADKT
HNIEAVIDAA SVRLGNSLLF CDMNFKIIAS STSVPVLDPL WKENTKQGYC CYEFISEVKE
LKSIRNASQT TAAVEVTCIK SPYRKLSSKV FHNQTQIGFL LMIEGENNFL PYHFEMLSII
SHVISYTIAY YTPNLFEKNS LYHELLYDML IGAPEKDIMP RLAELHFPDK MLVLFIRPTK
YLGLQYLKSS VCKNLKIQIP GTHVTYHKNG IVAVIPLKED TEMNLMLLEL LKCFSKKEHI
RIGISNSFAC IENFVSHYEQ AHAALKLGHK LNPEGLVYHY QNYQIFDLFS EAKNPDKLGR
FCHPALAVLR QYDHENSSQL YKTLCVFINK GCNIKLTSES LFIHRNSLVY RLNRITELSQ
VDLSDINTLF LLRLSFLIDQ YNEQNKSSAK SFQPNNALTI
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