Gene Cphy_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1621 
Symbol 
ID5744442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1999092 
End bp2000402 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content38% 
IMG OID641292721 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001558732 
Protein GI160879764 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00289243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGA AATTACGAAA CAGATTTATA ATGCTTAATA TGGTAATCAT TTCGGTAATG 
ATGCTTGCTG CCTTTGCTGT AATCTATATC ATGACCTATA CGAATATACA AAATGAAAAC
AATGCAAAAC TTCAAAAAGT TTCCGCTACT TACACCGTTG GCAAACAAGC AATTCTTCCT
AACACAATGT TTGGAGGACG TATTGCAAAT GGTACAATCC CAACCGACTA TACCCTTTCT
TTTAATATTA TCATTGACAG TGATGGCAGC CCTGTCAGTA TACATTCTTT TGTCGATATG
CCTGAAAAGA TGTATATAAA AGCTGCAGAG CTTGCGCTTT CCACAGGAAA ACATGCAGCG
AACATATCGC TTGATGGAAA GCGGTGGATG TTCCAAATCA ATGAGATAGG GAATCTAGCA
ATGAGGGGAT TTGAGGACAA CGGAACAGGG AAAGTTGTTC AGTTAATAAA TTGCAGTAAG
ATATCTTTTT TAGATATCAC GGAGTCACAG GGAATATTGA CTAATCTTTA CATTACATTT
GCTGTAATCG GTTTTCTAAT GCTTTTTGTT ATCTTTGGCA TTAGTGTGTT TTTTGCCAGA
CGATCTGTTG CCCCTGTTGA AATAGCGTAT ATGAAACAAA AGCAGTTTGT TACGGATGCC
TCTCATGAAC TCAAAACACC CATTGCATCT ATTGGCGCTA ATACCGACGT TCTCCTGGCA
AACAAGCAGG AAACCATCGA AAGTCAAAAA AAGTGGGTGG AATATATCAA GGCCGAAACC
GATCGTATGG GGAAACTCGT GGGCAATCTT TTATATCTTG CCAAAACTGA TAACGTTGAA
ATCGGCATGG ATAGCTTACC ATTTAATATC AGTGATACTA TCCGTGACAC CGTGTTATCT
ATGGAAGCTG TGGTATTTGA AAAAGGCTTG ATGCTTACGC AAAGTATTGA GCCAAATATC
ATTATAAATG GCGACAGTGA TAAGCTGGTA CAGGTAGTGA AAATACTGTT TGACAACGCC
ATAAAATATT CAAATAAAAA CGGTAGTATT GATATTGTAC TAGAACAAAC AAGACATCAA
GTGGTGTTTA CGATAAAAAA CACTGGAGAT GGTATTTCTT CAGAACATCT ACCAAAGATA
TTTGATCGTT TCTATCGCAC CGACCCGTCA AGAGCACATG ATGGTAGTTA TGGATTAGGG
TTGTCCATTG CCAAGGCAAT AATCGACAAC ACAGGTGGTA AGATTTATGC TACAAGTGTG
GAGGGAGAAA GTACTACCTT TATGTTTACG TTAAATAAAA ATAATTCTTA A
 
Protein sequence
MFKKLRNRFI MLNMVIISVM MLAAFAVIYI MTYTNIQNEN NAKLQKVSAT YTVGKQAILP 
NTMFGGRIAN GTIPTDYTLS FNIIIDSDGS PVSIHSFVDM PEKMYIKAAE LALSTGKHAA
NISLDGKRWM FQINEIGNLA MRGFEDNGTG KVVQLINCSK ISFLDITESQ GILTNLYITF
AVIGFLMLFV IFGISVFFAR RSVAPVEIAY MKQKQFVTDA SHELKTPIAS IGANTDVLLA
NKQETIESQK KWVEYIKAET DRMGKLVGNL LYLAKTDNVE IGMDSLPFNI SDTIRDTVLS
MEAVVFEKGL MLTQSIEPNI IINGDSDKLV QVVKILFDNA IKYSNKNGSI DIVLEQTRHQ
VVFTIKNTGD GISSEHLPKI FDRFYRTDPS RAHDGSYGLG LSIAKAIIDN TGGKIYATSV
EGESTTFMFT LNKNNS