Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1621 |
Symbol | |
ID | 5744442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1999092 |
End bp | 2000402 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641292721 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001558732 |
Protein GI | 160879764 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00289243 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGA AATTACGAAA CAGATTTATA ATGCTTAATA TGGTAATCAT TTCGGTAATG ATGCTTGCTG CCTTTGCTGT AATCTATATC ATGACCTATA CGAATATACA AAATGAAAAC AATGCAAAAC TTCAAAAAGT TTCCGCTACT TACACCGTTG GCAAACAAGC AATTCTTCCT AACACAATGT TTGGAGGACG TATTGCAAAT GGTACAATCC CAACCGACTA TACCCTTTCT TTTAATATTA TCATTGACAG TGATGGCAGC CCTGTCAGTA TACATTCTTT TGTCGATATG CCTGAAAAGA TGTATATAAA AGCTGCAGAG CTTGCGCTTT CCACAGGAAA ACATGCAGCG AACATATCGC TTGATGGAAA GCGGTGGATG TTCCAAATCA ATGAGATAGG GAATCTAGCA ATGAGGGGAT TTGAGGACAA CGGAACAGGG AAAGTTGTTC AGTTAATAAA TTGCAGTAAG ATATCTTTTT TAGATATCAC GGAGTCACAG GGAATATTGA CTAATCTTTA CATTACATTT GCTGTAATCG GTTTTCTAAT GCTTTTTGTT ATCTTTGGCA TTAGTGTGTT TTTTGCCAGA CGATCTGTTG CCCCTGTTGA AATAGCGTAT ATGAAACAAA AGCAGTTTGT TACGGATGCC TCTCATGAAC TCAAAACACC CATTGCATCT ATTGGCGCTA ATACCGACGT TCTCCTGGCA AACAAGCAGG AAACCATCGA AAGTCAAAAA AAGTGGGTGG AATATATCAA GGCCGAAACC GATCGTATGG GGAAACTCGT GGGCAATCTT TTATATCTTG CCAAAACTGA TAACGTTGAA ATCGGCATGG ATAGCTTACC ATTTAATATC AGTGATACTA TCCGTGACAC CGTGTTATCT ATGGAAGCTG TGGTATTTGA AAAAGGCTTG ATGCTTACGC AAAGTATTGA GCCAAATATC ATTATAAATG GCGACAGTGA TAAGCTGGTA CAGGTAGTGA AAATACTGTT TGACAACGCC ATAAAATATT CAAATAAAAA CGGTAGTATT GATATTGTAC TAGAACAAAC AAGACATCAA GTGGTGTTTA CGATAAAAAA CACTGGAGAT GGTATTTCTT CAGAACATCT ACCAAAGATA TTTGATCGTT TCTATCGCAC CGACCCGTCA AGAGCACATG ATGGTAGTTA TGGATTAGGG TTGTCCATTG CCAAGGCAAT AATCGACAAC ACAGGTGGTA AGATTTATGC TACAAGTGTG GAGGGAGAAA GTACTACCTT TATGTTTACG TTAAATAAAA ATAATTCTTA A
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Protein sequence | MFKKLRNRFI MLNMVIISVM MLAAFAVIYI MTYTNIQNEN NAKLQKVSAT YTVGKQAILP NTMFGGRIAN GTIPTDYTLS FNIIIDSDGS PVSIHSFVDM PEKMYIKAAE LALSTGKHAA NISLDGKRWM FQINEIGNLA MRGFEDNGTG KVVQLINCSK ISFLDITESQ GILTNLYITF AVIGFLMLFV IFGISVFFAR RSVAPVEIAY MKQKQFVTDA SHELKTPIAS IGANTDVLLA NKQETIESQK KWVEYIKAET DRMGKLVGNL LYLAKTDNVE IGMDSLPFNI SDTIRDTVLS MEAVVFEKGL MLTQSIEPNI IINGDSDKLV QVVKILFDNA IKYSNKNGSI DIVLEQTRHQ VVFTIKNTGD GISSEHLPKI FDRFYRTDPS RAHDGSYGLG LSIAKAIIDN TGGKIYATSV EGESTTFMFT LNKNNS
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