Gene Cphy_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1609 
Symbol 
ID5744431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1982218 
End bp1983036 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content31% 
IMG OID641292711 
ProductMerR family transcriptional regulator 
Protein accessionYP_001558722 
Protein GI160879754 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.822901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGA AGTTTACAGT CGGTGAAATC GCTAAATTGA GCGGATTATC CAAACAGACC 
CTTATCTACT ATGATAAGGA GAATGTATTT AAACCCAAAT TAGTCGACTC CAATAATAAC
TACCGTTACT ATACTGCAGA TCAAATTGAA GTATTGGACA GCATTCTAAT TCTTAAGGAA
ATTGGATTAT CCTTAAAAGA AATCAAAGAT TTTATGAATC ATCGTAATAG TGATAACGCT
GTTGCCTTAC TAAAAAATCA ACAAAAGGAA ATAAAACAAA AGATAAAACA ACTTTCTTTA
ATCGAAAATA GATTGGATTA TAAATTAAGA ACTTTACAAG AATTTGACCG TGATAGTGAG
CGTGTTCAGA TAACTACATT AGAAAAAACA GAATACTTGG CAATAGAACC GGTAACAACT
CCTAACGGAC TTCTAGACGT TGATTTAGCC ATAAAGAGAT TGTTAACAAA AGCGAATAAT
CATAACTATC CATATTATTA TCAAATAGGT GATATGGTTT CTAAAGAAAA TCTGCTATTA
GGCAATTATA TCAGCTTTGA ATATGCATTT CTTCCACTAC AAGTAGCACC AGAAAAAGGT
ACTTATCACA AGAAAGTAAA AGGAACCTAT GCGAAATGTT ACCACCAAGG ACCTTACAAA
AATATTACTG ATACTTATCA ATTCCTTATT GAATATATAA AAAAAGAAGG TTATCAGATA
GCCTCCCCAT CCTATGAATA TTGTATTTTA GATAGCTTAA CTACTAAAAA ATCCGAAGAG
TACGTTACTG AAATACAGAT AAAAATCGAG AAAACATAG
 
Protein sequence
MNTKFTVGEI AKLSGLSKQT LIYYDKENVF KPKLVDSNNN YRYYTADQIE VLDSILILKE 
IGLSLKEIKD FMNHRNSDNA VALLKNQQKE IKQKIKQLSL IENRLDYKLR TLQEFDRDSE
RVQITTLEKT EYLAIEPVTT PNGLLDVDLA IKRLLTKANN HNYPYYYQIG DMVSKENLLL
GNYISFEYAF LPLQVAPEKG TYHKKVKGTY AKCYHQGPYK NITDTYQFLI EYIKKEGYQI
ASPSYEYCIL DSLTTKKSEE YVTEIQIKIE KT