Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1582 |
Symbol | |
ID | 5744404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1946429 |
End bp | 1947925 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641292684 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001558695 |
Protein GI | 160879727 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0045193 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA AGAATGAGTT TGTTGGGATA TCGTTACAGG TAAAGCTAAT GTTAGCCTTT GCTGCGACGA TTGTTCTGGT CTTTGGAATG AATGCATATA TGTATGTGAA TATCAACAAT TTTATCAATC GATTGGATTC CATCTATGTT AGTAATATTA ATTTGAATGA GTTGGAAGAG GAACTTACGA ATGTTCAAAC CAGTATGACT AAGTTTTTAA ATACGAAGAC AACAGATGCG ATGGAAGAGT ATTATAAACA TGAGCAAAGT TACAGAAATG CAATCAAGTC ATTAAAAGAT GAGAAATCTT CTGATAAGTT AATACTCATG GAACGAAATA TCAAGAAGAT GTCAGAGCAT TATCTATTGT TAACAAATCA AACCATAGAG GCTAAGCGTG GTCGAAATGT TGAGAAATAT AAAGTTCGGT ATGAGAATGC AACGGCATCC TATACCTATA TTAGTACATA TATTTATAGT TTAAATAATG GATTGTTTAA AAATAACTCG ATGAATTACT TAGCTCTTTC TAATTCGATA CGATCGTTAG AACGTTTGAG TACATTTCTA ATCATGTCCA TTGCTTCTGG TAATATCATT GTTATTCTAA TCCTAACGCA AACGATTACC AGACCTCTGA AAATACTGGC TAAAACAGCG AACCAGGTTG CAGAGGGAAA TTTTGATGTA GAAGTAGTTG AAGTCAGTAG TCATGATGAG GTAGGAGTTG TGACCAAAGC GTTTGATCAG ATGGTGATAA GCATTCGTGA TTATATCACT AGACTGAAAG AAAGCGTAGA GAATGAACGA AATTTAAAAG AGCGGGAGTT ACGAATGGAA TCACATCTAA AAGATGCTCA ATTAAAATAT CTTCAAGCTC AGATTAATCC ACATTTTTTA TTTAATACAT TAAATGCTGG TGCTCAGCTT GCAATGTTTG AAGGTGCAGA ATCCACCTGT GAATATGTTC AAAATGTGGC TGAATTCTTT CGTTATAGTA TTAAGAAAAA TCATGAGGTG GTAGCACTTC ATGAGGAAAT CGAACTGGTT GACCATTATA TATATATTTT AAATGTGCGA TTTTCTGGAG CAATCCATTA TGAGAAACAC ATTGATGATA GATTGACTGA AATCACAGTT CCAAGTATGA TTTTACAGCC TATTGTTGAG AATAGCTTCC AATATGGATT ACGTGATATT GAATGGGAAG GGAAAATAGT ACTGTCGGTA TACTTAAATG AAGAAGAGGT TTGCGTCAGT ATATTTGACA ATGGTATTGG TATGGATGAA GAACAGGTGA AACAAATTAA TACCAGAAAA ACAAGAGAGA ATGTGGGGGA TAAGGACTCG AATGGCATTG GACTTAGTAA TGTTATGGAG AGATTGTCGC TTTATTTTAA CCAAAGTCAA ATAGTAACTG TATCAAGCGA GGGGAAGAAC TGTGGAACGG AGGTAACATT TCGCTTACCA TGGAAGCAGG AGGAGAAACA TGTATAA
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Protein sequence | MGRKNEFVGI SLQVKLMLAF AATIVLVFGM NAYMYVNINN FINRLDSIYV SNINLNELEE ELTNVQTSMT KFLNTKTTDA MEEYYKHEQS YRNAIKSLKD EKSSDKLILM ERNIKKMSEH YLLLTNQTIE AKRGRNVEKY KVRYENATAS YTYISTYIYS LNNGLFKNNS MNYLALSNSI RSLERLSTFL IMSIASGNII VILILTQTIT RPLKILAKTA NQVAEGNFDV EVVEVSSHDE VGVVTKAFDQ MVISIRDYIT RLKESVENER NLKERELRME SHLKDAQLKY LQAQINPHFL FNTLNAGAQL AMFEGAESTC EYVQNVAEFF RYSIKKNHEV VALHEEIELV DHYIYILNVR FSGAIHYEKH IDDRLTEITV PSMILQPIVE NSFQYGLRDI EWEGKIVLSV YLNEEEVCVS IFDNGIGMDE EQVKQINTRK TRENVGDKDS NGIGLSNVME RLSLYFNQSQ IVTVSSEGKN CGTEVTFRLP WKQEEKHV
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