Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1547 |
Symbol | |
ID | 5744369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1899632 |
End bp | 1901068 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641292649 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001558660 |
Protein GI | 160879692 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000265018 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAA AAAAAGTTAC AAGTAGTCTT TATTTTATTC AGCGGATCAG TAGTCTCATA GGTGTGATTC TTCTATTCAT TCCTGCAATT AATCCTTCAC GGATTAGTGG ATTAATTGGT AAAAATTTAT CTATTTTCAC CAGTGGATTT TTTTACTCTC GATTAACCCA GAATTTTGGG AGAGCGTTTA GTAAGGGCTG GGTTGGGACA ATGACTACCC AAGTTTTATT TCTTTCTAGC ATGATAGTCT GCATTGGATT TATTATTTGT GCAGCAGGTG CTTGCTTATC ACCGGGATGT CTTAAGATGA AAAAGCAAGG TAATATACTA AGCGTTATTG GTACAGTACT TGCTTTAATA GGAGCTTATG GAATTCGGTG GTCACAGATT GATATCAAAG GTACCTCCAA TCCAGATAAG GTTCAGCCGA TGGAAAGCAA TGCCCTTCTA ATTTTTATTG TACTTACATT ACTTATTTTA TTAACATCAC TCTTCTTATT AATTTTATTA CCAAAACCAG ATAAGAATGA AAAATACGAA ATGGAAACCA AATACAAGTT ATTCCTATTA ATAATGCCGT TTCTTATTCT TTGCTTTGTA TTTTCATATT TACCGTTGTT TGGATGGCGC TATGCTTTCT TTGATTACAA AGCAGGTGAT TCCTTATCTT TGGATAATTT CGTTGGATTT AAGTGGTTTA CATATTTATT TCAAAATAAA TCAACCAGAG GAGATATTGT AAGGGTTCTA AGAAACACTC TGGCTATGAG CGGTTTAGGG CTAGCAACCA GCTGGTGCGC TATGGCATTT GCTATATTTT TATGTGAGAT TAAGAGTCTT CGTTTACGAA GATTTATTCA AACCATTACA ACCATTCCTA ATTTTATTAG CTGGGTATTA GTATTTGCGG TTGCCTTTTC TATCTTTTCT ACAGATGGTT TTTTAAGTTC TATCTTAATT AAGTATGGTG TTATAGATAA TGGTGTGAAC TACTTAATGA GTAATAATCA TATGTGGTTA AAGATGCTAG CATGGGGAAT GTGGAAGGGA CTTGGATGGA GTGCGATTAT ATATATTGCT GCGATTTCAG GAATTGATCA GCAACTTTTT GAGGCAGCTA CGGTAGATGG AGCCGGAAGG TTTCAAAGGA TGTGGCATAT TACGGTTCCT TCCTTGCTAC CAACATTCTT AGTACTACTT GTTATGGCGA TTGCAGGTAT ATTAAGTAAT GGTATGGACC AATATTTAGT ATTTCAGAAT GCCTACAATA CTGACACTGT TACAGTTCTT GATTTATATG TGTATAAATT AGGTATTAAC AATGGTAAGA TTCCTCTTGC TACTGTAGTT GGTATGGCAA AATCCATTGT TAGTATTATC TTGTTATTTG GCGCTAATAA AGTCTCAAAA ATAATTCGTG GCAACAGTAT AATATAA
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Protein sequence | MKVKKVTSSL YFIQRISSLI GVILLFIPAI NPSRISGLIG KNLSIFTSGF FYSRLTQNFG RAFSKGWVGT MTTQVLFLSS MIVCIGFIIC AAGACLSPGC LKMKKQGNIL SVIGTVLALI GAYGIRWSQI DIKGTSNPDK VQPMESNALL IFIVLTLLIL LTSLFLLILL PKPDKNEKYE METKYKLFLL IMPFLILCFV FSYLPLFGWR YAFFDYKAGD SLSLDNFVGF KWFTYLFQNK STRGDIVRVL RNTLAMSGLG LATSWCAMAF AIFLCEIKSL RLRRFIQTIT TIPNFISWVL VFAVAFSIFS TDGFLSSILI KYGVIDNGVN YLMSNNHMWL KMLAWGMWKG LGWSAIIYIA AISGIDQQLF EAATVDGAGR FQRMWHITVP SLLPTFLVLL VMAIAGILSN GMDQYLVFQN AYNTDTVTVL DLYVYKLGIN NGKIPLATVV GMAKSIVSII LLFGANKVSK IIRGNSII
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