| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1489 |
|---|
| Symbol | |
|---|
| ID | 5742439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1832814 |
|---|
| End bp | 1833953 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292591 |
|---|
| Product | cysteine desulfurase family protein |
|---|
| Protein accession | YP_001558602 |
|---|
| Protein GI | 160879634 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.742565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATATT TTGATAACGC TGCAACCAGT CTAAAAAAGC CAGATTCTGT AGCAGATGCG
GTTTATGCTG CTATAAAAAA TATGGGGAAT AGCGGAAGAG GCTCTCATAC AGCTTCTTTA
GAGGCTGGAA GGGCTATTTA TGCAACGAGG GAAATACTTG CAAAACTATT TTGCATTAAG
GACGCAAGTC GTATTGCCTT TACTTCAAAT GCAACAGAAA GTCTTAATAT TGCAATAAAA
GGTTTGTTGC ATAAAGGAGA TCATGTTATC ACTACGGAAT TAGAGCATAA TAGTGTTTTG
CGACCTCTTT ATGAATTGGA GTCAAGCGGT GTAGAGCTCA CTATTATAAA AAGCGACTTA
TCTGGGAATA TCAAGATAGA AGAAATTGAG AAAAGTATAA AAAAGAATAC CAAGATGGTA
ATCTGTGGGC ACAGCTCTAA TTTAACAGGT AATCTACTTG ATATAAAAAG AATAGGAAAA
CTTTGCAGGG AAGAAAAAGT TTTATTTGTA GTGGATGCTG CACAAACAGC AGGTGTGTTC
CCAATCGATG TAGAAGAACA AAGTATTGAT GTTCTTTGCT TCACAGGACA TAAAGGACTT
CTTGGTCCAC AGGGAACTGG TGGTATTTAT GTTAGAGAAG GTGTTTTAGT ATCTCCATTA
AAAACTGGTG GAAGTGGCTT TTCATCTTTT TCCAAAACGC ATCCTGATGT AATGCCAGAG
TGTTTAGAAG CAGGTACTTT AAATGGACAT GGCATTGCTG GCTTATATGC GGGAGTTACT
TATATTTTGG AGAAAGGCAT CGATCAGATA AGAGAGAAGG AACAGAAGCT GATGTGGCAG
TTTTATAAAG GTATAATAGA TATTCCTAAT ATAAAAATTT ATGGTAGCTT TACTACAATC
GATAGAGCTG CAATTGTCAC GTTTAATATT GCAGATTATG ATTCGGGTGA AGTAAGTGAT
CAATTAGCAG AAGAGTTTGG TATTTATACA AGGTCAGGGG GACATTGTGC TCCGCTGCTC
CACGAAGCAC TCGGAACAAA AGAACAGGGA GCGGTTCGTT TTAGTTTTTC TCATTTTAAT
ACTGAGGAAG AAGTTAACAT AGCAATAGAT GCAGTAAAAA AGCTAGCAAT TGAAATCTAG
|
|---|
| Protein sequence | MIYFDNAATS LKKPDSVADA VYAAIKNMGN SGRGSHTASL EAGRAIYATR EILAKLFCIK
DASRIAFTSN ATESLNIAIK GLLHKGDHVI TTELEHNSVL RPLYELESSG VELTIIKSDL
SGNIKIEEIE KSIKKNTKMV ICGHSSNLTG NLLDIKRIGK LCREEKVLFV VDAAQTAGVF
PIDVEEQSID VLCFTGHKGL LGPQGTGGIY VREGVLVSPL KTGGSGFSSF SKTHPDVMPE
CLEAGTLNGH GIAGLYAGVT YILEKGIDQI REKEQKLMWQ FYKGIIDIPN IKIYGSFTTI
DRAAIVTFNI ADYDSGEVSD QLAEEFGIYT RSGGHCAPLL HEALGTKEQG AVRFSFSHFN
TEEEVNIAID AVKKLAIEI
|
|---|
| |