Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1459 |
Symbol | |
ID | 5742409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 1800584 |
End bp | 1801462 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641292561 |
Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
Protein accession | YP_001558572 |
Protein GI | 160879604 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000185683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTA TATCAGGAAA TGAATTGCTG AAATTATGTG AGGAAAACCA CTATCGGATT TCAGATGTGA TGCGGGAACG TGAAGCCAGC GAGTTCGGTT CCAGTCCAGA AGAGACCATT GGCCGTATGA AGGAAGCTTA CCGGATTATG AAAGAAGCCT GCCACAAACC ACTGGATGAA CCTGTGATTT CCGTTGGCGG ACTAATCGGG GGAGAATCTG CAAAGGTACG AGACAGAAGG AGATCAGGAA AATCCATTTG CGGAAGCATG CTGTCCAAGG CGATTACCTA TTCACTAGCC GTTTTAGAAG TGAATGCTTC GATGGGACTT ATTGTGGCGG CGCCTACGGC AGGAAGCTCC GGGGTGCTAC CTGGACTTCT ACTTGCTCTA GAAGAAGAGT TTTCCCTGGA TGACAATCAG ATCATAGATG GTCTTTTTAC GGCAAGTGCG GTTGGTTATC TGATTATGAG GAACGCTACC GTAGCTGGAG CACAGGCTGG CTGTCAGGCT GAAGTCGGTG CAGCTTCTGC AATGGCAGCG GCAGCGGCAG CAGAAATCAT GGGCGGAACA CCGCGGCAGT GCTTGGATGC AGCTACTGTT GCATTATCAA ATCTCTTAGG GCTTGTCTGC GATCCGGTAG CCGGTCTGGT GGAATATCCC TGTCAGAACC GTAATGTTAT AGGTGCTGCC AATGCACTGG TATGTGCAGA AATGGCATTA TCAGGAATAG TACAGTTCAT TCCATTTGAC CAGATGGTGG ACACCATGAT GGCTGTGGGG CGTTCGATTC CATTTGAATT AAGAGAAACT GCACTTGGTG GCTGCGCGGC TACGGACGCT GCATGCAGGA AGACCTGTGA GATTTTTAAA TCAAAGTAA
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Protein sequence | MDFISGNELL KLCEENHYRI SDVMREREAS EFGSSPEETI GRMKEAYRIM KEACHKPLDE PVISVGGLIG GESAKVRDRR RSGKSICGSM LSKAITYSLA VLEVNASMGL IVAAPTAGSS GVLPGLLLAL EEEFSLDDNQ IIDGLFTASA VGYLIMRNAT VAGAQAGCQA EVGAASAMAA AAAAEIMGGT PRQCLDAATV ALSNLLGLVC DPVAGLVEYP CQNRNVIGAA NALVCAEMAL SGIVQFIPFD QMVDTMMAVG RSIPFELRET ALGGCAATDA ACRKTCEIFK SK
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