| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1393 |
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| Symbol | |
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| ID | 5742343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1733168 |
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| End bp | 1734928 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641292496 |
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| Product | histidine kinase internal region |
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| Protein accession | YP_001558507 |
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| Protein GI | 160879539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000217072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT GGTTGAGTAA ATTAAGCATA TTTCAAAAAA TAATTTTGAT TATTTCCTTA
ACCATTGCTA TTTCGTTAAG AATTACCAAT AATTTTACAG AGAAAACAAT TACTAATATT
GTAACAAAGC AAATTTATGA AGGAAATATA AGCACGCTGA GTTCTTCCTC AGCTCAGATA
AGTGATAAGA TAAATCGTAA TGTGTCTTTA ATTCGTGCTT TAAGTACCGA CTCTCAAGTA
AAAGAGTATT TACAGGAAGT TCCGAGAAGT GATTATGAGA ATATAAACAT CATTAACAAG
ATGAATGAAA TTATTTTAAA CTATGTTTAT AACATGTTTG ATACAGAAAC AATGATAGCT
ATCATATCAA GTAAAGATGA TGTATATGCA AACTGGGAAA TGCAAAATCA GGAAACATTA
ATTAATTTAA AGAATGAATA CTTGCGTTAC CATAATAAGG GTCAGGACAA AGAATATACC
TTATATACCA AGATGGAATT GGATATATCA TTATCCTCCA ATAAAACGTT CAAAAATAAA
TTTACAATGG CACTGCCGAT TTATAGCAAT AAAAGCGAGA ACAATATTTT GGGAGTGGCA
ATTGTATTTA TAGAGGAAGA AAATTTATAT GATGCTATTT CTTTTAAGGT TGATGAACAA
CATACAACGG TACTAATTGA TAAATCAAAT AATATAATTT CAGCCAAAGA CAAAACACTG
ATTGGAAAAC AAGTGGAAGT GGCATTTAAC TTTGTGAAAA ATAAATCCTC TAAAGGTTAC
TATGCCGATA AAGAAGGCAA GATGATAATA ACCCAGAAGC AAGTGAATAA GTCTAAATTT
ACTATCATAG ATATTATGAA AGTCCAGTAT GTACAGGAAC AAGTTGACCT GGTAATGAGG
AATGTGCAAA TAATTAATAT TCTTACAATT ATTATTATAA TTATTGTTTG CTATTTTACA
TTAAGAGGAA TCACAAAACC ACTAAAGAGA TTAACAGAGC AAATGGTGAC CCAGGATTAT
TCAACCTTTG AACAAGATAA CCAGAATCTA GGCAAAAACG AGGTCAGACT ATTAGAAAAA
AGCTTTCAAG TCATGAAATA CGATATAGAA GAGCTGATAA AAGAAAATAA ATTAAAAGAA
GAAGAAAAGC GAAAGACAGA AATTAAAGCA CTTCAATCAC AGATTAAGCC TCATTTTTTA
TTTAATACGC TGAATGCAAT TCGCTGTACA ATTATAAATA ACAATAATGA TAAGGCAGCA
GATTTAGTTT ATAAACTAGC AATGCTTCTA CGTATGACTT TAGTGAAAGG TGATGCATTA
ATTACTTTAA AAGAAGAATT AGAAACAATA GGATATTATT TAGATATTCT CATCATGCGT
CATGGGACTC AAATCGATTA CCAGATTGAT ATTTCACCCT TGGCAGAAGA AGTTTTAGTT
CCAAAACTAT TTTTGCAGCC ACTTGTTGAA AATAGTGTAG TTCATGGATT TTCACAGCAG
AATATAGATG CTACGATTAA AATTAAGACT ATTTTTGTAG ACAATTTTCT TGTTATTCAG
GTAATGGATA ACGGTAAGGG GATAGAGGAA GATATTGATA TGATTAAATC TGACATCCAA
TATGAAAATG AGTTTTCTGG TATCGGACTT ATGAATGTTA ATAGTAGGTT GAAGCTTTAT
TTTGGAAAAG AATCGGGACT GAAAATCTAT TCGAAAAACG GATGGACTAT TTCTGAAGTA
TGGATACATC AACATAGATA G
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| Protein sequence | MKKWLSKLSI FQKIILIISL TIAISLRITN NFTEKTITNI VTKQIYEGNI STLSSSSAQI
SDKINRNVSL IRALSTDSQV KEYLQEVPRS DYENINIINK MNEIILNYVY NMFDTETMIA
IISSKDDVYA NWEMQNQETL INLKNEYLRY HNKGQDKEYT LYTKMELDIS LSSNKTFKNK
FTMALPIYSN KSENNILGVA IVFIEEENLY DAISFKVDEQ HTTVLIDKSN NIISAKDKTL
IGKQVEVAFN FVKNKSSKGY YADKEGKMII TQKQVNKSKF TIIDIMKVQY VQEQVDLVMR
NVQIINILTI IIIIIVCYFT LRGITKPLKR LTEQMVTQDY STFEQDNQNL GKNEVRLLEK
SFQVMKYDIE ELIKENKLKE EEKRKTEIKA LQSQIKPHFL FNTLNAIRCT IINNNNDKAA
DLVYKLAMLL RMTLVKGDAL ITLKEELETI GYYLDILIMR HGTQIDYQID ISPLAEEVLV
PKLFLQPLVE NSVVHGFSQQ NIDATIKIKT IFVDNFLVIQ VMDNGKGIEE DIDMIKSDIQ
YENEFSGIGL MNVNSRLKLY FGKESGLKIY SKNGWTISEV WIHQHR
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