Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1334 |
Symbol | ruvB |
ID | 5743721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1665084 |
End bp | 1666094 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641292439 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001558450 |
Protein GI | 160879482 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00146189 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA GAATGATTAC AACTGAGCTG ATGGAGGAAG ACGTTAAGTT AGAAACTAGC CTTCGTCCCC AGATGCTCGA GGATTATATC GGACAAAAAA AGGCAAAGGA AAATCTAAAG GTCTACATAG AGGCTGCTAA GCAGAGGAAA GAGTCATTAG ACCATGTGTT ATTCTTTGGA CCTCCTGGTC TTGGTAAAAC GACATTAGCT GGCATTATAG CAAATGAAAT GGGAGTTAAT TTAAAAACCA CCGCTGGACC AGCCATTGAA AAGCCAGGGG ATATGGCAGC GATATTAAAC AATCTTCAAG AGGGAGATGT TTTATTTATC GATGAAATTC ACCGTTTGAA TCGTCAGGTA GAGGAATTAT TATATCCTGC GATGGAGGAT TACGTCATTG ATATTGTAAT TGGAAAAGGT GCTACTGCAA AGTCGATACG TTTAGATTTA CCTAGATTTA CATTAGTTGG TGCAACTACT AGAGCAGGTA TGTTAACAGC ACCACTTCGT GACCGTTTCG GTGTAGTACA TCGCTTGGAG TTTTATACTA CGGAGGAATT AAAAGAGATA ATTACTCGTT CTGCAAAGGT GTTACAGGTA GAAATCGACG ACTGTGGTGC TACAGAACTT GCAAGGCGAT CTCGTGGAAC TCCAAGATTA GCAAATCGAC TATTAAAAAG AGTCAGGGAT TTTGCTCAAG TAAAATATGA CGGACGTATT ACCGAAGAGG TGGCACGTTT TGCGCTTGAT ATATTAGAGG TGGATAAGCT GGGGTTAGAT CATATTGACC GCCAGATTTT AGTAACGATG ATTGAAAAAT TCGCTGGTGG TCCAGTTGGA ATTGATGCAA TTGCTACGAC AATTGGAGAA GATTCTGGTA CAGTGGAAGA GGTATACGAG CCATACTTAG TACAGAATGG ATTAATCCTT CGTACACCAC GTGGAAGAGT TGTAACGCAG GAAGCTTATT TGCATTGTGG TTTACCATAT GAAAATAAGG AATTAAGTTA A
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Protein sequence | MAKRMITTEL MEEDVKLETS LRPQMLEDYI GQKKAKENLK VYIEAAKQRK ESLDHVLFFG PPGLGKTTLA GIIANEMGVN LKTTAGPAIE KPGDMAAILN NLQEGDVLFI DEIHRLNRQV EELLYPAMED YVIDIVIGKG ATAKSIRLDL PRFTLVGATT RAGMLTAPLR DRFGVVHRLE FYTTEELKEI ITRSAKVLQV EIDDCGATEL ARRSRGTPRL ANRLLKRVRD FAQVKYDGRI TEEVARFALD ILEVDKLGLD HIDRQILVTM IEKFAGGPVG IDAIATTIGE DSGTVEEVYE PYLVQNGLIL RTPRGRVVTQ EAYLHCGLPY ENKELS
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