Gene Cphy_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1334 
SymbolruvB 
ID5743721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1665084 
End bp1666094 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID641292439 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001558450 
Protein GI160879482 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00146189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA GAATGATTAC AACTGAGCTG ATGGAGGAAG ACGTTAAGTT AGAAACTAGC 
CTTCGTCCCC AGATGCTCGA GGATTATATC GGACAAAAAA AGGCAAAGGA AAATCTAAAG
GTCTACATAG AGGCTGCTAA GCAGAGGAAA GAGTCATTAG ACCATGTGTT ATTCTTTGGA
CCTCCTGGTC TTGGTAAAAC GACATTAGCT GGCATTATAG CAAATGAAAT GGGAGTTAAT
TTAAAAACCA CCGCTGGACC AGCCATTGAA AAGCCAGGGG ATATGGCAGC GATATTAAAC
AATCTTCAAG AGGGAGATGT TTTATTTATC GATGAAATTC ACCGTTTGAA TCGTCAGGTA
GAGGAATTAT TATATCCTGC GATGGAGGAT TACGTCATTG ATATTGTAAT TGGAAAAGGT
GCTACTGCAA AGTCGATACG TTTAGATTTA CCTAGATTTA CATTAGTTGG TGCAACTACT
AGAGCAGGTA TGTTAACAGC ACCACTTCGT GACCGTTTCG GTGTAGTACA TCGCTTGGAG
TTTTATACTA CGGAGGAATT AAAAGAGATA ATTACTCGTT CTGCAAAGGT GTTACAGGTA
GAAATCGACG ACTGTGGTGC TACAGAACTT GCAAGGCGAT CTCGTGGAAC TCCAAGATTA
GCAAATCGAC TATTAAAAAG AGTCAGGGAT TTTGCTCAAG TAAAATATGA CGGACGTATT
ACCGAAGAGG TGGCACGTTT TGCGCTTGAT ATATTAGAGG TGGATAAGCT GGGGTTAGAT
CATATTGACC GCCAGATTTT AGTAACGATG ATTGAAAAAT TCGCTGGTGG TCCAGTTGGA
ATTGATGCAA TTGCTACGAC AATTGGAGAA GATTCTGGTA CAGTGGAAGA GGTATACGAG
CCATACTTAG TACAGAATGG ATTAATCCTT CGTACACCAC GTGGAAGAGT TGTAACGCAG
GAAGCTTATT TGCATTGTGG TTTACCATAT GAAAATAAGG AATTAAGTTA A
 
Protein sequence
MAKRMITTEL MEEDVKLETS LRPQMLEDYI GQKKAKENLK VYIEAAKQRK ESLDHVLFFG 
PPGLGKTTLA GIIANEMGVN LKTTAGPAIE KPGDMAAILN NLQEGDVLFI DEIHRLNRQV
EELLYPAMED YVIDIVIGKG ATAKSIRLDL PRFTLVGATT RAGMLTAPLR DRFGVVHRLE
FYTTEELKEI ITRSAKVLQV EIDDCGATEL ARRSRGTPRL ANRLLKRVRD FAQVKYDGRI
TEEVARFALD ILEVDKLGLD HIDRQILVTM IEKFAGGPVG IDAIATTIGE DSGTVEEVYE
PYLVQNGLIL RTPRGRVVTQ EAYLHCGLPY ENKELS