| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1317 |
|---|
| Symbol | |
|---|
| ID | 5744923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1648378 |
|---|
| End bp | 1649763 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292422 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001558433 |
|---|
| Protein GI | 160879465 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.107956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA TAGATTTAAT ATACATACAA AGTATCATTG GAGACAAAGA AAGAGTACTC
TATGGTGAAA ATATAAACGA AGAATATAGC CATGATGAAT TAAGCGGTAC AGAAAGCTAC
CCAGATGTAG TGGTTAGAGT AACCTCAGCA GAAGAAATAT CTGCGATTAT GAAATATGCA
TATGATAATA ATATTCCGGT AACTCCTCGT GGAGCAGGAA CCGGACTGGT AGGCTCTTCT
GTGGCCATGG AACATGGTAT TATGTTAGAA ACTGGATTAA TGAATCATGT ACTGGAACTG
GATGAAGATA ATCTTACTAT CACTGTCGAG CCAGGTGTAT TATTAATGGA CTTGGCCGCT
TACGTAGAAG AAAGAGACTT ATTCTATCCT CCGGATCCAG GTGAAAAATC AGCTACCATA
GGAGGTAATA TCAGCACCAA TGCAGGTGGA ATGAGAGCGG TTAAATACGG AGTTACCAGA
GATTATGTCC GTGGCCTTGA AGTGGTGTTA CCTAATGGAA CTATTACAAC TTTTGGCGGA
AAGGTTGTAA AGAATAGTAC CGGTTATGCT TTAAAGGATT TAATGGTAGG CTCGGAAGGA
ACACTTGGAA TTATAACTAA GGCCGTACTA AAATTATTAC CATTGCCTCA AAAAGCCATC
AGTTTATTAA TACCATTTCC AAGTTTAGAA CAAGCCATCA GAACCGTACC ATTAATTATA
AAATCAAAGT CCATTCCTAC CGCCATTGAA TTTATGCAAC GAGAAGTAAT CATGGATGCA
GAAAAGTATT TGGGTAAGAA GTTCCCTGAC AATTCTGCCG ATGCTTATCT TTTATTAAAG
TTTGATGGTA ATTCCGTTGA AGAAATTGAA AAATCCTATG AAAGAGTAGC GGGGATATGC
TTAGAACAGG GGGCTATAGA TATTTTAATC TCTGATACGG AAGAGAGAGA AGAATCCATA
TGGAAAGCAA GAGGTGCATT CTTAGAGGCT ATTAAAGGAT CCACTACCTA TATGGATGAA
GTAGACGTTG TTGTACCAAG AAGCTCAGTT AATGAGATGG TAGAATACAT CCATAATCTT
CATGAAAAAG TAGACATTCG AATCAAAAGC TTTGGTCACG CAGGAGATGG CAACCTTCAT
GCCTATATCT TAAAGGATGA TTTAAGTAAT GAGGAGTGGG AACTAAAGAT GAAAGCTGCA
ATGGATAACA TCTATGAAAA AGCTAGGGAA TTAAATGGCC AGGTTTCCGG TGAACATGGA
ATTGGATATG CAAAAAAATC CTATCTATTA GAATCTATGG ATCCTGTAGT TGTAGAACTA
ATGAAAGGGA TTAAGGAAGC CTTTGATCCA AAAAATATAT TGAATCCACA TAAAGTCTTT
AAATAA
|
|---|
| Protein sequence | MNQIDLIYIQ SIIGDKERVL YGENINEEYS HDELSGTESY PDVVVRVTSA EEISAIMKYA
YDNNIPVTPR GAGTGLVGSS VAMEHGIMLE TGLMNHVLEL DEDNLTITVE PGVLLMDLAA
YVEERDLFYP PDPGEKSATI GGNISTNAGG MRAVKYGVTR DYVRGLEVVL PNGTITTFGG
KVVKNSTGYA LKDLMVGSEG TLGIITKAVL KLLPLPQKAI SLLIPFPSLE QAIRTVPLII
KSKSIPTAIE FMQREVIMDA EKYLGKKFPD NSADAYLLLK FDGNSVEEIE KSYERVAGIC
LEQGAIDILI SDTEEREESI WKARGAFLEA IKGSTTYMDE VDVVVPRSSV NEMVEYIHNL
HEKVDIRIKS FGHAGDGNLH AYILKDDLSN EEWELKMKAA MDNIYEKARE LNGQVSGEHG
IGYAKKSYLL ESMDPVVVEL MKGIKEAFDP KNILNPHKVF K
|
|---|
| |