| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1307 |
|---|
| Symbol | |
|---|
| ID | 5744913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1634993 |
|---|
| End bp | 1635727 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641292412 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001558423 |
|---|
| Protein GI | 160879455 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0002961 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGGT ACGGTTATTT TTATATGGAA AATCAATTTG AAAGAAGCGC ATTTATCATT
GGGGAAGAAG GGGTAGAAAA ACTCCAGCAA TCTCATGTAG CAGTATTTGG CGTAGGTGGT
GTTGGAGGTT ATGTGGTGGA GGCTCTCGTT CGTAGTGGGA TTGGAGAGAT TACTATTGTA
GATAACGATA CAATTTGTTT GTCAAATATT AACCGACAGA TTATAGCAAC TCATGATACC
GTAGGTCAAT ACAAAGTTGA TGTAATGGAA AAGCGTATTA AGTCCATTAA TCCAAATGCG
ATTATACATT CGTATCGTAG CTTTTTTCTA CCAGAGACTG CAGAGGAGTT TGATTTTGCT
TCTTATAATT ATGTTGTAGA CGCAATCGAT ACAGTAGCAG GAAAACTTTC TCTTGTAGAG
AAAGCTCAAG CAGTGGGGAC TCCTATTATG TGTAGTATGG GAGCGGGAAA TAAATTAGAC
CCTACCAAGT TTGAAGTTGC GGATATCTAC AAAACTTCTA TTTGTCCTCT TGCCAAAGTG
ATGCGTTATG AGTGTAAGAA GAGAGGAATC AAGAAATTAA AGGTTGTATA TTCAAAGGAA
TTACCTATTA CACCAGTAAT GCAACCACAA GAACAAACAC AAAGACGCTC GACACCAGGA
AGTATCGCGT TTGTTCCATC GGCAGCAGGA TTAATTATTG CTTCCACAGT TGTAAGAGAT
TTGTTAGGAA AGTAA
|
|---|
| Protein sequence | MERYGYFYME NQFERSAFII GEEGVEKLQQ SHVAVFGVGG VGGYVVEALV RSGIGEITIV
DNDTICLSNI NRQIIATHDT VGQYKVDVME KRIKSINPNA IIHSYRSFFL PETAEEFDFA
SYNYVVDAID TVAGKLSLVE KAQAVGTPIM CSMGAGNKLD PTKFEVADIY KTSICPLAKV
MRYECKKRGI KKLKVVYSKE LPITPVMQPQ EQTQRRSTPG SIAFVPSAAG LIIASTVVRD
LLGK
|
|---|
| |