Gene Cphy_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1243 
Symbol 
ID5744849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1568748 
End bp1569437 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content32% 
IMG OID641292349 
ProductABC transporter related 
Protein accessionYP_001558360 
Protein GI160879392 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATAG AGATTAAAAA TTTAAAGAAA ACTTATGGAA TCGGCGAAAC TACAGTACAT 
GCTCTAAAAG GAATTAACCT ATCGATTGAA CAAGGTGAGT TTATTGCTAT TGTAGGAACA
AGTGGGAGTG GTAAAAGTAC ATTGCTAAAT CTTATCGGAG GATTAGATTA TCCTACGGAA
GGAAATATTC TTATTAACGA TAGAGATATC TACGCATTGA AACCGGATGA ATTAACAATA
TTTCGAAGAA GATCTATTGG TTTTGTATTT CAAAGCTATA ATTTGGTACC TATATTAAAT
GTTTATCAAA ACATAATGTT ACCATTACAA TTAGATAATG TAAGACCAGA TAAAAAGTTT
TTAGAACTTA TAATAAATAC TCTCGGTATC TCTGAAAAGA AAAACAGTCT TCCAAATAAT
TTATCTGGCG GGCAGCAGCA AAGAGTTGCA ATTGCAAGAG CATTGATAGC ACATCCACAA
GTAATATTAG CGGATGAACC TACCGGTAAT TTAGATAGTA AAACAGCTCT TGAAGTAATT
TTATTATTGA AGCAGTTAAA TGAAACCTAC GGTCAGACAA TTATAATGAT AACGCATGAT
GAAGAAATTG CGCAAATTGC TACAAGGAGA ATACATATAG AGGATGGTCG TTTAATCTCT
GATACGAAGG AGGTATTTGG CCATGAATAA
 
Protein sequence
MLIEIKNLKK TYGIGETTVH ALKGINLSIE QGEFIAIVGT SGSGKSTLLN LIGGLDYPTE 
GNILINDRDI YALKPDELTI FRRRSIGFVF QSYNLVPILN VYQNIMLPLQ LDNVRPDKKF
LELIINTLGI SEKKNSLPNN LSGGQQQRVA IARALIAHPQ VILADEPTGN LDSKTALEVI
LLLKQLNETY GQTIIMITHD EEIAQIATRR IHIEDGRLIS DTKEVFGHE