Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1243 |
Symbol | |
ID | 5744849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1568748 |
End bp | 1569437 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641292349 |
Product | ABC transporter related |
Protein accession | YP_001558360 |
Protein GI | 160879392 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATAG AGATTAAAAA TTTAAAGAAA ACTTATGGAA TCGGCGAAAC TACAGTACAT GCTCTAAAAG GAATTAACCT ATCGATTGAA CAAGGTGAGT TTATTGCTAT TGTAGGAACA AGTGGGAGTG GTAAAAGTAC ATTGCTAAAT CTTATCGGAG GATTAGATTA TCCTACGGAA GGAAATATTC TTATTAACGA TAGAGATATC TACGCATTGA AACCGGATGA ATTAACAATA TTTCGAAGAA GATCTATTGG TTTTGTATTT CAAAGCTATA ATTTGGTACC TATATTAAAT GTTTATCAAA ACATAATGTT ACCATTACAA TTAGATAATG TAAGACCAGA TAAAAAGTTT TTAGAACTTA TAATAAATAC TCTCGGTATC TCTGAAAAGA AAAACAGTCT TCCAAATAAT TTATCTGGCG GGCAGCAGCA AAGAGTTGCA ATTGCAAGAG CATTGATAGC ACATCCACAA GTAATATTAG CGGATGAACC TACCGGTAAT TTAGATAGTA AAACAGCTCT TGAAGTAATT TTATTATTGA AGCAGTTAAA TGAAACCTAC GGTCAGACAA TTATAATGAT AACGCATGAT GAAGAAATTG CGCAAATTGC TACAAGGAGA ATACATATAG AGGATGGTCG TTTAATCTCT GATACGAAGG AGGTATTTGG CCATGAATAA
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Protein sequence | MLIEIKNLKK TYGIGETTVH ALKGINLSIE QGEFIAIVGT SGSGKSTLLN LIGGLDYPTE GNILINDRDI YALKPDELTI FRRRSIGFVF QSYNLVPILN VYQNIMLPLQ LDNVRPDKKF LELIINTLGI SEKKNSLPNN LSGGQQQRVA IARALIAHPQ VILADEPTGN LDSKTALEVI LLLKQLNETY GQTIIMITHD EEIAQIATRR IHIEDGRLIS DTKEVFGHE
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