| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1201 |
|---|
| Symbol | |
|---|
| ID | 5743300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1517785 |
|---|
| End bp | 1519074 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641292306 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_001558318 |
|---|
| Protein GI | 160879350 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGAA TTGCATTTAT CTTTATTCTC CTTTTATATA TAGCAATCTA CTATGCTTAT
GATACCTATA GTAGAATTTT TAAGCGTGGA TTCCTAGAGG AATTAATTTC GATTATTAAA
ATAAACTGCT TGCTTGCAGT AACTCTTACT TTCTCAATGT TTGTCTTCCA GGAAGGAACA
GCATATTCGA GATTATTTTT CTTGACTTTT TTTACACTTA ATATATTAAT AAATTATTTA
GCCAGATTGT ATTTTAAGTT TTTTTTACTT GCTGTTTATA AAAAGAGTGG CTCTAGCAGT
AAGCTTATGA TAATAACAAC TTTAGATAAA GCAAAAGAAG TTTTAGATAG AATTAGAAAA
GAAAATGACT GGGAGTATCA AGTTACATAC TTAACTATAG TGGACAGGCA ATTAATTGGA
GACTGGATTG AAGAAATACC TGTTAAGGCA AATTTAGTTA ATATGTATGA AGTAGCAAGA
CAAGAGGTAG TGGATGAAGT ATTTATATAT CTTCCTAATG ACTCCTCTTT ATCTATTGAT
TTAGATGAGA CAATACTTGA ATTTGTTAAT ATGGGAGTGA CGGTTAACTT AAGTATTAAT
GCATTTGGAT TAAAGGTACG TGAGAAAATA GTTCGTGAAA TAAGTGGGTA CTATGCACTG
AGTTTTAGTA CACGTTTATT AAAGGAATCC CAAAAACACT TGAAAAGGGT TATGGATGTT
GCAGGAGGAA TTGTAGGATG TATATTAACA TTAGTATTGA TTGTGTTCCT AGCCCCAGCT
ATTAAATTAG AATCACCAGG ACCAATTTTC TTTTCACAAG TGCGAGTAGG TAAAAACGGA
AGACGTTTTA AAATATATAA ATTTCGTTCC ATGGATTTAG ATGCAGAAAA GCGCAAGGAA
GAATTGATGA ATCAAAATGA AATGGAAGGC TTTATGTTTA AAATGAAAGA CGATCCGAGA
TTAACAAAAG TAGGTAAGTT TATGCGAAAA ACAAGTCTTG ATGAGTTTCC ACAGTTCTTT
AACATCTTAA AAGGAGATAT GAGTTTAGTG GGAACCAGGC CGCCTACAGA AGATGAGTTC
CTTAGGTATG AAGGGAGGCA TAAGAGGAGG CTAGCTCTTA AATGTGGATT GACTGGGTTA
TGGCAGGTTA GTGGAAGAAG TGATATTCAG GATTTTGAAG AAGTGGTTAA GTTGGATCTG
GAATATATCG ATAACTGGTC ATTTAAGTTG GATATAAAGA TATTATTAAA AACAGTGGTA
GTTGTATTAT TTGGAAAGGG ATCTAGATAA
|
|---|
| Protein sequence | MYGIAFIFIL LLYIAIYYAY DTYSRIFKRG FLEELISIIK INCLLAVTLT FSMFVFQEGT
AYSRLFFLTF FTLNILINYL ARLYFKFFLL AVYKKSGSSS KLMIITTLDK AKEVLDRIRK
ENDWEYQVTY LTIVDRQLIG DWIEEIPVKA NLVNMYEVAR QEVVDEVFIY LPNDSSLSID
LDETILEFVN MGVTVNLSIN AFGLKVREKI VREISGYYAL SFSTRLLKES QKHLKRVMDV
AGGIVGCILT LVLIVFLAPA IKLESPGPIF FSQVRVGKNG RRFKIYKFRS MDLDAEKRKE
ELMNQNEMEG FMFKMKDDPR LTKVGKFMRK TSLDEFPQFF NILKGDMSLV GTRPPTEDEF
LRYEGRHKRR LALKCGLTGL WQVSGRSDIQ DFEEVVKLDL EYIDNWSFKL DIKILLKTVV
VVLFGKGSR
|
|---|
| |